Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 Y_RNA.331-201ENST00000365267 102 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 Y_RNA.376-201ENST00000365638 108 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 Y_RNA.446-201ENST00000384178 104 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 Y_RNA.556-201ENST00000384677 113 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 MIR215-201ENST00000384858 110 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 MIR1262-201ENST00000408276 93 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 RNU2-54P-201ENST00000410299 190 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 AC005042.3-201ENST00000453230 174 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 RNU6-570P-201ENST00000517051 105 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
ATP2B1P20020 AC087441.2-201ENST00000529141 262 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 MIR7106-201ENST00000612419 65 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 MIR6852-201ENST00000621699 66 ntBASIC3.18□□□□□ -1.9
ATP2B1P20020 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.18□□□□□ -1.9
ATP2B1P20020 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ATP2B1P20020 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2B1P20020 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2B1P20020 snoU2_19.2-201ENST00000363024 80 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 VTRNA1-1-201ENST00000363120 99 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 Y_RNA.461-201ENST00000384263 103 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 RNU6-574P-201ENST00000384265 107 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 Y_RNA.581-201ENST00000391017 97 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 RN7SKP284-201ENST00000411002 343 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AC107083.1-201ENST00000439643 279 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AC025750.2-201ENST00000442609 450 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AL135938.1-201ENST00000443141 297 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.17□□□□□ -1.9
ATP2B1P20020 RNU6-496P-201ENST00000516145 99 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 RNU6-155P-201ENST00000516347 100 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AC004486.1-201ENST00000546846 233 ntBASIC3.17□□□□□ -1.9
ATP2B1P20020 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2B1P20020 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.17□□□□□ -1.9
ATP2B1P20020 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.17□□□□□ -1.9
ATP2B1P20020 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ATP2B1P20020 RNU4-90P-201ENST00000362773 141 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 Y_RNA.84-201ENST00000363011 104 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.16□□□□□ -1.9
ATP2B1P20020 RNU2-12P-201ENST00000517216 168 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 MIR3684-201ENST00000579779 74 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 MIR3149-201ENST00000584629 83 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 AC022202.1-201ENST00000613515 211 ntBASIC3.16□□□□□ -1.9
ATP2B1P20020 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.16□□□□□ -1.9
ATP2B1P20020 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.16□□□□□ -1.9
ATP2B1P20020 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ATP2B1P20020 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
ATP2B1P20020 MIR340-201ENST00000362125 95 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 RNU1-112P-201ENST00000364401 164 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 Y_RNA.452-201ENST00000384202 108 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 Y_RNA.500-201ENST00000384466 111 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 TRBVB-201ENST00000477100 408 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 HMGB3P17-201ENST00000504195 649 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 AC107222.1-201ENST00000510899 637 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 RNA5SP367-201ENST00000516557 118 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 AC079600.2-201ENST00000550076 130 ntBASIC3.15□□□□□ -1.91
ATP2B1P20020 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.15□□□□□ -1.91
ATP2B1P20020 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.15□□□□□ -1.91
ATP2B1P20020 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.15□□□□□ -1.91
ATP2B1P20020 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.14□□□□□ -1.91
ATP2B1P20020 RNU6-1266P-201ENST00000362794 105 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 Y_RNA.286-201ENST00000364813 102 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 RNU6-102P-201ENST00000384485 104 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 RNU6-160P-201ENST00000384591 107 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 RNU6-1199P-201ENST00000411249 104 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AC008134.1-201ENST00000420943 193 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AC087499.2-201ENST00000432861 149 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP2B1P20020 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
ATP2B1P20020 HSPE1P25-201ENST00000455484 251 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AC008749.1-201ENST00000597650 306 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AL033523.1-201ENST00000605153 153 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 AL590240.4-201ENST00000616908 390 ntBASIC3.14□□□□□ -1.91
ATP2B1P20020 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ATP2B1P20020 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 SNORD81.1-201ENST00000363064 77 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 Y_RNA.396-201ENST00000383949 103 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 MT-TW-201ENST00000387382 68 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 AL138827.1-201ENST00000402666 306 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 RNU6-1203P-201ENST00000410703 110 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 UBE2DNL-203ENST00000474922 222 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 RNU6-966P-201ENST00000516479 104 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 RNU6-856P-201ENST00000516959 98 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 AC025647.1-201ENST00000517879 253 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP2B1P20020 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.13□□□□□ -1.91
ATP2B1P20020 MIR3670-2-201ENST00000582974 65 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 MIR3670-1-201ENST00000584160 65 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 MIR3670-3-201ENST00000584855 65 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 AL031274.2-201ENST00000599419 203 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 MIR3670-4-201ENST00000612260 65 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 U6.115-201ENST00000636045 103 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 IGHVIII-44-202ENST00000636235 289 ntBASIC3.13□□□□□ -1.91
ATP2B1P20020 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.13□□□□□ -1.91
ATP2B1P20020 SNORD115-3-201ENST00000363100 82 ntBASIC3.12□□□□□ -1.91
ATP2B1P20020 SNORA5B-201ENST00000363786 132 ntBASIC3.12□□□□□ -1.91
ATP2B1P20020 SNORA25.6-201ENST00000364121 118 ntBASIC3.12□□□□□ -1.91
ATP2B1P20020 Y_RNA.243-201ENST00000364481 109 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms