Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AC137590.2-201ENST00000619709 240 ntBASIC0.5□□□□□ -2.33
ATF1P18846 Y_RNA.201-201ENST00000364052 96 ntBASIC0.49□□□□□ -2.33
ATF1P18846 SNORD87-201ENST00000364849 89 ntBASIC0.49□□□□□ -2.33
ATF1P18846 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ATF1P18846 SNORD116-13-201ENST00000384408 92 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AL353193.1-201ENST00000421444 268 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.49□□□□□ -2.33
ATF1P18846 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.49□□□□□ -2.33
ATF1P18846 MTND4P32-201ENST00000437189 1237 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AL049830.1-201ENST00000468034 425 ntBASIC0.49□□□□□ -2.33
ATF1P18846 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.49□□□□□ -2.33
ATF1P18846 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.49□□□□□ -2.33
ATF1P18846 CYP3A137P-201ENST00000562436 69 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.49□□□□□ -2.33
ATF1P18846 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.49□□□□□ -2.33
ATF1P18846 AL162424.1-201ENST00000602325 221 ntBASIC0.49□□□□□ -2.33
ATF1P18846 PRELID3BP2-201ENST00000605362 201 ntBASIC0.49□□□□□ -2.33
ATF1P18846 AC022960.3-201ENST00000619794 441 ntBASIC0.49□□□□□ -2.33
ATF1P18846 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
ATF1P18846 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ATF1P18846 RNU6-1329P-201ENST00000365664 107 ntBASIC0.48□□□□□ -2.33
ATF1P18846 RNU6-424P-201ENST00000384367 105 ntBASIC0.48□□□□□ -2.33
ATF1P18846 U8.16-201ENST00000391279 133 ntBASIC0.48□□□□□ -2.33
ATF1P18846 MTATP6P18-201ENST00000417994 673 ntBASIC0.48□□□□□ -2.33
ATF1P18846 USP9YP29-201ENST00000445112 563 ntBASIC0.48□□□□□ -2.33
ATF1P18846 RPL39P39-201ENST00000455840 151 ntBASIC0.48□□□□□ -2.33
ATF1P18846 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.48□□□□□ -2.33
ATF1P18846 MTND4P7-201ENST00000523876 130 ntBASIC0.48□□□□□ -2.33
ATF1P18846 MTND1P35-201ENST00000526739 508 ntBASIC0.48□□□□□ -2.33
ATF1P18846 MIR3908-201ENST00000579798 126 ntBASIC0.48□□□□□ -2.33
ATF1P18846 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.48□□□□□ -2.33
ATF1P18846 SNORD11B-201ENST00000607707 90 ntBASIC0.48□□□□□ -2.33
ATF1P18846 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.48□□□□□ -2.33
ATF1P18846 uc_338.17-201ENST00000619633 179 ntBASIC0.48□□□□□ -2.33
ATF1P18846 AL390237.1-201ENST00000404226 1415 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-1120P-201ENST00000362988 108 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-996P-201ENST00000365438 107 ntBASIC0.47□□□□□ -2.33
ATF1P18846 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-17P-201ENST00000384245 107 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-18P-201ENST00000384527 107 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNY3P10-201ENST00000384764 102 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-1158P-201ENST00000391167 107 ntBASIC0.47□□□□□ -2.33
ATF1P18846 AL049545.1-201ENST00000401856 572 ntBASIC0.47□□□□□ -2.33
ATF1P18846 MIR1185-2-201ENST00000408687 86 ntBASIC0.47□□□□□ -2.33
ATF1P18846 RNU6-325P-201ENST00000411132 105 ntBASIC0.47□□□□□ -2.33
ATF1P18846 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.47□□□□□ -2.33
ATF1P18846 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.47□□□□□ -2.33
ATF1P18846 RNU7-90P-201ENST00000459216 62 ntBASIC0.47□□□□□ -2.33
ATF1P18846 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ATF1P18846 AL357312.1-201ENST00000603879 298 ntBASIC0.47□□□□□ -2.33
ATF1P18846 BNIP3P10-201ENST00000605360 577 ntBASIC0.47□□□□□ -2.33
ATF1P18846 AL096861.1-201ENST00000610899 123 ntBASIC0.47□□□□□ -2.33
ATF1P18846 AL121757.2-201ENST00000611223 313 ntBASIC0.47□□□□□ -2.33
ATF1P18846 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
ATF1P18846 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
ATF1P18846 Y_RNA.100-201ENST00000363141 102 ntBASIC0.46□□□□□ -2.34
ATF1P18846 Y_RNA.167-201ENST00000363735 109 ntBASIC0.46□□□□□ -2.34
ATF1P18846 SNORA2.2-201ENST00000365473 135 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RNU6-348P-201ENST00000384386 107 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RNU6-110P-201ENST00000384508 104 ntBASIC0.46□□□□□ -2.34
ATF1P18846 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ATF1P18846 MIR320B2-201ENST00000408479 138 ntBASIC0.46□□□□□ -2.34
ATF1P18846 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.46□□□□□ -2.34
ATF1P18846 RNU7-63P-201ENST00000459054 62 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RPS27P22-201ENST00000478056 241 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RPL23AP75-201ENST00000491601 451 ntBASIC0.46□□□□□ -2.34
ATF1P18846 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.46□□□□□ -2.34
ATF1P18846 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.46□□□□□ -2.34
ATF1P18846 AC022493.2-201ENST00000506122 481 ntBASIC0.46□□□□□ -2.34
ATF1P18846 AC092436.3-201ENST00000511788 257 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
ATF1P18846 RNU6-430P-201ENST00000517078 107 ntBASIC0.46□□□□□ -2.34
ATF1P18846 AC027419.1-201ENST00000522976 328 ntBASIC0.46□□□□□ -2.34
ATF1P18846 FAM106DP-201ENST00000586416 501 ntBASIC0.46□□□□□ -2.34
ATF1P18846 MIR337-201ENST00000362281 93 ntBASIC0.45□□□□□ -2.34
ATF1P18846 RNU6-137P-201ENST00000363680 108 ntBASIC0.45□□□□□ -2.34
ATF1P18846 RNU4-20P-201ENST00000365601 151 ntBASIC0.45□□□□□ -2.34
ATF1P18846 Y_RNA.378-201ENST00000365652 113 ntBASIC0.45□□□□□ -2.34
ATF1P18846 RNU6-784P-201ENST00000384330 106 ntBASIC0.45□□□□□ -2.34
ATF1P18846 MIR521-1-201ENST00000384902 87 ntBASIC0.45□□□□□ -2.34
ATF1P18846 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.45□□□□□ -2.34
ATF1P18846 MTCO2P19-201ENST00000427513 598 ntBASIC0.45□□□□□ -2.34
ATF1P18846 Z82188.1-201ENST00000436709 154 ntBASIC0.45□□□□□ -2.34
ATF1P18846 AC104332.1-201ENST00000440471 797 ntBASIC0.45□□□□□ -2.34
ATF1P18846 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.45□□□□□ -2.34
ATF1P18846 AC245047.8-201ENST00000456455 284 ntBASIC0.45□□□□□ -2.34
ATF1P18846 TPTE2P5-203ENST00000458118 728 ntBASIC0.45□□□□□ -2.34
ATF1P18846 MTCO3P38-201ENST00000468910 766 ntBASIC0.45□□□□□ -2.34
ATF1P18846 AC087854.1-201ENST00000519706 414 ntBASIC0.45□□□□□ -2.34
ATF1P18846 AC007834.2-201ENST00000536310 343 ntBASIC0.45□□□□□ -2.34
ATF1P18846 MIR5692C1-201ENST00000585309 91 ntBASIC0.45□□□□□ -2.34
ATF1P18846 AC136443.5-201ENST00000603741 370 ntBASIC0.45□□□□□ -2.34
ATF1P18846 CASC19-280ENST00000642102 1351 ntBASIC0.45□□□□□ -2.34
ATF1P18846 SNORD18A-201ENST00000363753 72 ntBASIC0.44□□□□□ -2.34
ATF1P18846 MIR520E-201ENST00000384867 87 ntBASIC0.44□□□□□ -2.34
ATF1P18846 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
ATF1P18846 AL606923.1-201ENST00000406616 190 ntBASIC0.44□□□□□ -2.34
ATF1P18846 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms