Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 Y_RNA.582-201ENST00000391023 95 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 MRPL42P3-201ENST00000401492 326 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 RAB28P5-201ENST00000427490 651 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.68□□□□□ -2.3
CTLA4P16410 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.68□□□□□ -2.3
CTLA4P16410 SCARNA16.2-201ENST00000516520 172 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 RNU6-1198P-201ENST00000516904 67 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
CTLA4P16410 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.68□□□□□ -2.3
CTLA4P16410 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
CTLA4P16410 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.68□□□□□ -2.3
CTLA4P16410 AL513534.2-201ENST00000603836 250 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 AL133215.3-201ENST00000609801 448 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 AC073534.2-201ENST00000620377 381 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 AL513423.1-201ENST00000621695 132 ntBASIC0.68□□□□□ -2.3
CTLA4P16410 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 MIR337-201ENST00000362281 93 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.67□□□□□ -2.3
CTLA4P16410 SNORA69-201ENST00000383895 132 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 Y_RNA.481-201ENST00000384373 102 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 MIR487A-201ENST00000385009 80 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 MIR514A2-201ENST00000385131 88 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 MIR514A3-201ENST00000385132 88 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 RNU6-440P-201ENST00000390882 105 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 MIR1185-2-201ENST00000408687 86 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.67□□□□□ -2.3
CTLA4P16410 MTND3P16-201ENST00000452205 344 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 RNU1-117P-201ENST00000517041 158 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 SNORA70.22-201ENST00000517160 124 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 RNU7-128P-201ENST00000517247 62 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AC016957.1-201ENST00000534895 309 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AL137100.2-201ENST00000555786 315 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AC008088.1-201ENST00000580993 280 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AL162424.1-201ENST00000602325 221 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 AC211469.2-201ENST00000605461 205 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 FAM157A-202ENST00000615155 405 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 U6.73-201ENST00000619194 103 ntBASIC0.67□□□□□ -2.3
CTLA4P16410 SNORD50.1-201ENST00000362987 71 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 U3.8-201ENST00000363675 217 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 SNORD115-32-201ENST00000364079 82 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
CTLA4P16410 AL034345.1-201ENST00000407768 123 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 RNU6-1054P-201ENST00000411293 104 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 RNU2-64P-201ENST00000411315 191 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.66□□□□□ -2.3
CTLA4P16410 AC245047.3-201ENST00000429428 127 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AC005002.2-201ENST00000438228 269 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 RPS4XP11-201ENST00000446897 772 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AC092991.1-201ENST00000477176 376 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.66□□□□□ -2.3
CTLA4P16410 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.66□□□□□ -2.3
CTLA4P16410 ACA64.5-201ENST00000516207 127 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 RNU7-99P-201ENST00000516271 62 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 RNU6-1332P-201ENST00000516666 104 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AC026371.1-201ENST00000551867 419 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.66□□□□□ -2.3
CTLA4P16410 MIR5695-201ENST00000579717 85 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 AC022432.1-201ENST00000595739 310 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 MIR6866-201ENST00000638146 69 ntBASIC0.66□□□□□ -2.3
CTLA4P16410 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
CTLA4P16410 RNU6-137P-201ENST00000363680 108 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 SNORD113-7-201ENST00000363762 77 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU1-93P-201ENST00000364704 169 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU4-9P-201ENST00000364951 139 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 Y_RNA.553-201ENST00000384670 102 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 SNORA12.1-201ENST00000390873 148 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 CALM2P3-201ENST00000400429 449 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU6-648P-201ENST00000410190 107 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.65□□□□□ -2.31
CTLA4P16410 AC079354.2-201ENST00000453523 154 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU7-94P-201ENST00000459576 63 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 TRBVA-201ENST00000498804 316 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 SNORA31.4-201ENST00000516049 129 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU6-835P-201ENST00000516974 104 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 RNU6-58P-201ENST00000517143 103 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.65□□□□□ -2.31
CTLA4P16410 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.65□□□□□ -2.31
CTLA4P16410 MIR4653-201ENST00000585107 83 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 MIR4781-201ENST00000585250 76 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 AC073349.3-201ENST00000617616 186 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 SNORD3E-202ENST00000627253 216 ntBASIC0.65□□□□□ -2.31
CTLA4P16410 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
CTLA4P16410 AC018630.2-201ENST00000534866 2403 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNU4-79P-201ENST00000362764 141 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNU6-128P-201ENST00000383976 107 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 SNORD116-8-201ENST00000384365 95 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNU6-505P-201ENST00000384427 107 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 MIR146A-201ENST00000385201 99 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 MIR660-201ENST00000385235 97 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 MIR653-201ENST00000385279 96 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 SNORD12-201ENST00000391002 90 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 RNU6-1186P-201ENST00000410429 97 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.64□□□□□ -2.31
CTLA4P16410 AL353572.1-201ENST00000442490 417 ntBASIC0.64□□□□□ -2.31
CTLA4P16410 MTCO1P19-201ENST00000443487 500 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 278.7 ms