Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU7-14P-201ENST00000459331 62 ntBASIC3.55□□□□□ -1.84
NID1P14543 RNU2-58P-201ENST00000516403 183 ntBASIC3.55□□□□□ -1.84
NID1P14543 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.55□□□□□ -1.84
NID1P14543 MIR5685-201ENST00000579080 79 ntBASIC3.55□□□□□ -1.84
NID1P14543 MIR3129-201ENST00000581095 76 ntBASIC3.55□□□□□ -1.84
NID1P14543 AL137849.1-201ENST00000604767 169 ntBASIC3.55□□□□□ -1.84
NID1P14543 AC012531.5-201ENST00000611375 151 ntBASIC3.55□□□□□ -1.84
NID1P14543 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NID1P14543 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.55□□□□□ -1.84
NID1P14543 AC012442.3-202ENST00000636742 206 ntBASIC3.55□□□□□ -1.84
NID1P14543 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.55□□□□□ -1.84
NID1P14543 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NID1P14543 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.55□□□□□ -1.84
NID1P14543 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NID1P14543 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
NID1P14543 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.66-201ENST00000362862 102 ntBASIC3.54□□□□□ -1.84
NID1P14543 SNORA63.5-201ENST00000363548 123 ntBASIC3.54□□□□□ -1.84
NID1P14543 RNU6-1209P-201ENST00000363655 107 ntBASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.220-201ENST00000364244 109 ntBASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.796-201ENST00000364268 102 ntBASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.799-201ENST00000364992 102 ntBASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.323-201ENST00000365157 109 ntBASIC3.54□□□□□ -1.84
NID1P14543 RNU6-975P-201ENST00000384296 105 ntBASIC3.54□□□□□ -1.84
NID1P14543 Y_RNA.486-201ENST00000384398 107 ntBASIC3.54□□□□□ -1.84
NID1P14543 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.54□□□□□ -1.84
NID1P14543 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.54□□□□□ -1.84
NID1P14543 AC008739.3-201ENST00000603262 127 ntBASIC3.54□□□□□ -1.84
NID1P14543 AL442128.1-201ENST00000615151 90 ntBASIC3.54□□□□□ -1.84
NID1P14543 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.54□□□□□ -1.84
NID1P14543 AL137067.1-201ENST00000615933 120 ntBASIC3.54□□□□□ -1.84
NID1P14543 AL035470.1-201ENST00000622571 220 ntBASIC3.54□□□□□ -1.84
NID1P14543 AC002064.3-201ENST00000623448 346 ntBASIC3.54□□□□□ -1.84
NID1P14543 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NID1P14543 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NID1P14543 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.54□□□□□ -1.84
NID1P14543 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
NID1P14543 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 AC063976.3-201ENST00000426849 329 ntBASIC3.53□□□□□ -1.84
NID1P14543 AL133547.1-201ENST00000448546 220 ntBASIC3.53□□□□□ -1.84
NID1P14543 AP002884.2-201ENST00000471647 395 ntBASIC3.53□□□□□ -1.84
NID1P14543 RPL36AP48-201ENST00000485521 314 ntBASIC3.53□□□□□ -1.84
NID1P14543 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.53□□□□□ -1.84
NID1P14543 SNORA70.14-201ENST00000516205 110 ntBASIC3.53□□□□□ -1.84
NID1P14543 RNU6-504P-201ENST00000516568 104 ntBASIC3.53□□□□□ -1.84
NID1P14543 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.53□□□□□ -1.84
NID1P14543 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.53□□□□□ -1.84
NID1P14543 AC020914.4-201ENST00000597690 277 ntBASIC3.53□□□□□ -1.84
NID1P14543 AC012314.7-201ENST00000619693 93 ntBASIC3.53□□□□□ -1.84
NID1P14543 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.53□□□□□ -1.84
NID1P14543 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NID1P14543 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.85
NID1P14543 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NID1P14543 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NID1P14543 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NID1P14543 AC010680.1-201ENST00000590024 3590 ntBASIC3.52□□□□□ -1.85
NID1P14543 RNU1-18P-201ENST00000363062 164 ntBASIC3.52□□□□□ -1.85
NID1P14543 SNORD6-201ENST00000365444 73 ntBASIC3.52□□□□□ -1.85
NID1P14543 MIR29B2-201ENST00000385055 81 ntBASIC3.52□□□□□ -1.85
NID1P14543 RNU6-750P-201ENST00000390946 107 ntBASIC3.52□□□□□ -1.85
NID1P14543 RNU2-37P-201ENST00000410695 177 ntBASIC3.52□□□□□ -1.85
NID1P14543 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 HMGN2P7-201ENST00000456186 273 ntBASIC3.52□□□□□ -1.85
NID1P14543 RN7SL93P-201ENST00000463035 293 ntBASIC3.52□□□□□ -1.85
NID1P14543 TRBV12-2-201ENST00000489763 344 ntBASIC3.52□□□□□ -1.85
NID1P14543 RN7SKP12-201ENST00000516275 143 ntBASIC3.52□□□□□ -1.85
NID1P14543 RNA5SP164-201ENST00000516533 110 ntBASIC3.52□□□□□ -1.85
NID1P14543 RN7SKP209-201ENST00000516888 304 ntBASIC3.52□□□□□ -1.85
NID1P14543 AC079598.5-201ENST00000547460 117 ntBASIC3.52□□□□□ -1.85
NID1P14543 AC110741.2-201ENST00000605278 268 ntBASIC3.52□□□□□ -1.85
NID1P14543 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
NID1P14543 AC096577.2-201ENST00000611455 153 ntBASIC3.52□□□□□ -1.85
NID1P14543 JPX_2.1-201ENST00000614161 69 ntBASIC3.52□□□□□ -1.85
NID1P14543 AL121772.2-201ENST00000614331 297 ntBASIC3.52□□□□□ -1.85
NID1P14543 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.52□□□□□ -1.85
NID1P14543 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NID1P14543 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.52□□□□□ -1.85
NID1P14543 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.51□□□□□ -1.85
NID1P14543 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NID1P14543 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.51□□□□□ -1.85
NID1P14543 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
NID1P14543 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NID1P14543 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NID1P14543 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NID1P14543 RNU6-1292P-201ENST00000383856 107 ntBASIC3.51□□□□□ -1.85
NID1P14543 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.51□□□□□ -1.85
NID1P14543 AC018634.1-201ENST00000437554 401 ntBASIC3.51□□□□□ -1.85
NID1P14543 RPS4XP11-201ENST00000446897 772 ntBASIC3.51□□□□□ -1.85
NID1P14543 AC016717.1-201ENST00000448918 286 ntBASIC3.51□□□□□ -1.85
NID1P14543 RPS27P22-201ENST00000478056 241 ntBASIC3.51□□□□□ -1.85
NID1P14543 AC021205.2-201ENST00000480069 347 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms