Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.9□□□□□ -2.27
COL11A1P12107 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.9□□□□□ -2.27
COL11A1P12107 RPL39P29-201ENST00000447779 157 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 SNRPGP7-201ENST00000469016 106 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 MTCO2P30-201ENST00000503662 364 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AC116353.2-201ENST00000505332 712 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AK3P2-201ENST00000507976 429 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.9□□□□□ -2.27
COL11A1P12107 RNU6-864P-201ENST00000516256 108 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 RNA5SP54-201ENST00000516951 92 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 RNU6-586P-201ENST00000517265 104 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AC115990.1-201ENST00000526957 301 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AC025423.5-201ENST00000550230 219 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.9□□□□□ -2.27
COL11A1P12107 AP001836.1-201ENST00000604675 523 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.9□□□□□ -2.27
COL11A1P12107 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.9□□□□□ -2.27
COL11A1P12107 AL132822.1-201ENST00000617063 513 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.9□□□□□ -2.27
COL11A1P12107 AL450472.1-202ENST00000637286 180 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.9□□□□□ -2.27
COL11A1P12107 AC008163.1-202ENST00000636004 2889 ntBASIC0.9□□□□□ -2.27
COL11A1P12107 CBX3P1-201ENST00000325243 554 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 SNORD114-6-201ENST00000364393 72 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-1303P-201ENST00000364841 107 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 Y_RNA.339-201ENST00000365325 102 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 SNORA25B-201ENST00000365507 128 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-438P-201ENST00000365561 103 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 Y_RNA.390-201ENST00000383932 102 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-1156P-201ENST00000410365 100 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 MTATP6P13-201ENST00000438531 667 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.89□□□□□ -2.27
COL11A1P12107 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.89□□□□□ -2.27
COL11A1P12107 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 OR2AQ1P-201ENST00000451972 200 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 HMGN1P12-201ENST00000499125 195 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC022447.4-201ENST00000504053 364 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-567P-201ENST00000516746 107 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 SNORA59B-202ENST00000578183 701 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 POLR3GP2-201ENST00000588366 668 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 CYP2C61P-201ENST00000604072 290 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL11A1P12107 TCL6_2.1-201ENST00000615162 119 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 U1.36-201ENST00000620684 176 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 MIR6513-201ENST00000621188 64 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC009033.1-201ENST00000624279 431 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL11A1P12107 AL589743.1-201ENST00000551932 2712 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU4-15P-201ENST00000362613 141 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-655P-201ENST00000362858 107 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 SNORA29-201ENST00000384183 140 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-790P-201ENST00000384479 105 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-160P-201ENST00000384591 107 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 RNA5SP219-201ENST00000390940 113 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AL357139.1-201ENST00000407792 426 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 MRPS10P2-201ENST00000431226 381 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 RNU6-1198P-201ENST00000516904 67 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AP000763.2-201ENST00000540641 163 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC018630.3-201ENST00000542637 96 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.89□□□□□ -2.27
COL11A1P12107 MIR4422-201ENST00000581938 83 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 MIR3942-201ENST00000585264 109 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC146944.4-201ENST00000602697 718 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC009994.1-201ENST00000606889 253 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 PCGEM1.1-201ENST00000613431 131 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC093913.1-201ENST00000614178 329 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 AC097372.5-201ENST00000623665 376 ntBASIC0.89□□□□□ -2.27
COL11A1P12107 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.89□□□□□ -2.27
COL11A1P12107 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
COL11A1P12107 RNU6-212P-201ENST00000362642 104 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 RNU1-23P-201ENST00000363361 144 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 RNU6-1286P-201ENST00000383871 107 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 SNORD14D-201ENST00000384390 87 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 Y_RNA.573-201ENST00000384763 105 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL11A1P12107 SNORA26.3-201ENST00000391119 136 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 MTND3P8-201ENST00000412909 339 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 RPL30P13-201ENST00000418873 348 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 AC243428.1-201ENST00000421099 264 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.88□□□□□ -2.27
COL11A1P12107 MTND3P10-201ENST00000450967 341 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.88□□□□□ -2.27
COL11A1P12107 AF186996.7-201ENST00000492781 209 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 MTCO1P29-201ENST00000496868 288 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL11A1P12107 AC100830.2-201ENST00000581636 240 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 FAM157A-202ENST00000615155 405 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.88□□□□□ -2.27
COL11A1P12107 AL136221.1-201ENST00000621449 509 ntBASIC0.88□□□□□ -2.27
COL11A1P12107 RNU6-562P-201ENST00000362731 107 ntBASIC0.87□□□□□ -2.27
COL11A1P12107 Y_RNA.88-201ENST00000363029 99 ntBASIC0.87□□□□□ -2.27
COL11A1P12107 Y_RNA.212-201ENST00000364177 102 ntBASIC0.87□□□□□ -2.27
COL11A1P12107 RNU6-245P-201ENST00000384020 107 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms