Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 MIR4680-201ENST00000580906 66 ntBASIC2.18□□□□□ -2.06
PCNAP12004 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AC007229.1-201ENST00000590455 412 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AC022432.1-201ENST00000595739 310 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AL353621.2-201ENST00000605340 133 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AL078596.1-201ENST00000624856 447 ntBASIC2.18□□□□□ -2.06
PCNAP12004 AC008873.1-201ENST00000625051 138 ntBASIC2.18□□□□□ -2.06
PCNAP12004 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
PCNAP12004 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PCNAP12004 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.17□□□□□ -2.06
PCNAP12004 Y_RNA.27-201ENST00000362540 103 ntBASIC2.17□□□□□ -2.06
PCNAP12004 RNU5F-3P-201ENST00000363767 117 ntBASIC2.17□□□□□ -2.06
PCNAP12004 RNU6-961P-201ENST00000363893 105 ntBASIC2.17□□□□□ -2.06
PCNAP12004 SNORD14.1-201ENST00000365609 90 ntBASIC2.17□□□□□ -2.06
PCNAP12004 MIR300-201ENST00000401138 83 ntBASIC2.17□□□□□ -2.06
PCNAP12004 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
PCNAP12004 AC123900.1-201ENST00000420390 96 ntBASIC2.17□□□□□ -2.06
PCNAP12004 RNU6-408P-201ENST00000515910 100 ntBASIC2.17□□□□□ -2.06
PCNAP12004 RNU6-1012P-201ENST00000516606 109 ntBASIC2.17□□□□□ -2.06
PCNAP12004 MIR4659A-201ENST00000580269 81 ntBASIC2.17□□□□□ -2.06
PCNAP12004 MIR4448-201ENST00000584360 86 ntBASIC2.17□□□□□ -2.06
PCNAP12004 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.17□□□□□ -2.06
PCNAP12004 AL590240.4-201ENST00000616908 390 ntBASIC2.17□□□□□ -2.06
PCNAP12004 AC007742.2-201ENST00000618226 398 ntBASIC2.17□□□□□ -2.06
PCNAP12004 AL138825.1-201ENST00000618587 192 ntBASIC2.17□□□□□ -2.06
PCNAP12004 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.17□□□□□ -2.06
PCNAP12004 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
PCNAP12004 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.17□□□□□ -2.06
PCNAP12004 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.16□□□□□ -2.06
PCNAP12004 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
PCNAP12004 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCNAP12004 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
PCNAP12004 Y_RNA.389-201ENST00000383924 113 ntBASIC2.16□□□□□ -2.06
PCNAP12004 Y_RNA.424-201ENST00000384063 103 ntBASIC2.16□□□□□ -2.06
PCNAP12004 MIR634-201ENST00000385208 97 ntBASIC2.16□□□□□ -2.06
PCNAP12004 RNU6-823P-201ENST00000391042 103 ntBASIC2.16□□□□□ -2.06
PCNAP12004 SNORD78.2-201ENST00000391076 69 ntBASIC2.16□□□□□ -2.06
PCNAP12004 MTCO3P19-201ENST00000415864 321 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC113618.1-201ENST00000416747 285 ntBASIC2.16□□□□□ -2.06
PCNAP12004 BX510359.4-201ENST00000423750 193 ntBASIC2.16□□□□□ -2.06
PCNAP12004 PCNPP5-201ENST00000452246 481 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
PCNAP12004 RNU6-475P-201ENST00000516073 104 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AP002001.1-203ENST00000534002 267 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC018448.1-201ENST00000552843 316 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC026271.5-201ENST00000577873 130 ntBASIC2.16□□□□□ -2.06
PCNAP12004 MIR4719-201ENST00000585233 84 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC124312.5-201ENST00000604451 268 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AC013412.1-201ENST00000610687 192 ntBASIC2.16□□□□□ -2.06
PCNAP12004 AL021879.1-201ENST00000611756 288 ntBASIC2.16□□□□□ -2.06
PCNAP12004 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.16□□□□□ -2.06
PCNAP12004 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.16□□□□□ -2.06
PCNAP12004 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PCNAP12004 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
PCNAP12004 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCNAP12004 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
PCNAP12004 MIR221-201ENST00000385135 110 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AC018634.1-201ENST00000437554 401 ntBASIC2.15□□□□□ -2.07
PCNAP12004 MTCO1P44-201ENST00000441935 243 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.15□□□□□ -2.07
PCNAP12004 RNU6-625P-201ENST00000459412 107 ntBASIC2.15□□□□□ -2.07
PCNAP12004 RNU7-57P-201ENST00000459540 60 ntBASIC2.15□□□□□ -2.07
PCNAP12004 RPL26P26-201ENST00000480251 434 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AC023442.1-201ENST00000531247 422 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AC055872.1-201ENST00000570978 278 ntBASIC2.15□□□□□ -2.07
PCNAP12004 RPS29P30-201ENST00000600975 111 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AL109918.3-201ENST00000603072 338 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.812-201ENST00000610788 101 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
PCNAP12004 PART1_1.1-201ENST00000611761 217 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.784-201ENST00000613803 101 ntBASIC2.15□□□□□ -2.07
PCNAP12004 AC240442.1-201ENST00000616055 283 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.787-201ENST00000616522 101 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.780-201ENST00000617336 101 ntBASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.801-201ENST00000619005 101 ntBASIC2.15□□□□□ -2.07
PCNAP12004 IGHVIII-44-202ENST00000636235 289 ntBASIC2.15□□□□□ -2.07
PCNAP12004 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PCNAP12004 LINC02555-201ENST00000563933 1951 ntBASIC2.15□□□□□ -2.07
PCNAP12004 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCNAP12004 Y_RNA.99-201ENST00000363138 105 ntBASIC2.14□□□□□ -2.07
PCNAP12004 Y_RNA.158-201ENST00000363651 101 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU6-975P-201ENST00000384296 105 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU2-40P-201ENST00000410833 196 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU6-130P-201ENST00000411112 103 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU6-57P-201ENST00000411348 103 ntBASIC2.14□□□□□ -2.07
PCNAP12004 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.14□□□□□ -2.07
PCNAP12004 FCF1P4-201ENST00000448326 183 ntBASIC2.14□□□□□ -2.07
PCNAP12004 AC055731.1-201ENST00000474387 401 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU6-397P-201ENST00000516226 104 ntBASIC2.14□□□□□ -2.07
PCNAP12004 RNU2-19P-201ENST00000517288 84 ntBASIC2.14□□□□□ -2.07
PCNAP12004 MIR4529-201ENST00000578110 78 ntBASIC2.14□□□□□ -2.07
PCNAP12004 MIR4672-201ENST00000583126 81 ntBASIC2.14□□□□□ -2.07
PCNAP12004 AL390123.1-201ENST00000603216 237 ntBASIC2.14□□□□□ -2.07
PCNAP12004 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.14□□□□□ -2.07
PCNAP12004 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCNAP12004 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.14□□□□□ -2.07
PCNAP12004 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCNAP12004 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCNAP12004 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms