Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC02555-201ENST00000563933 1951 ntBASIC1.51□□□□□ -2.17
TOP1P11387 Y_RNA.48-201ENST00000362710 103 ntBASIC1.51□□□□□ -2.17
TOP1P11387 Y_RNA.332-201ENST00000365271 113 ntBASIC1.51□□□□□ -2.17
TOP1P11387 Y_RNA.482-201ENST00000384377 111 ntBASIC1.51□□□□□ -2.17
TOP1P11387 RNU6-933P-201ENST00000384424 107 ntBASIC1.51□□□□□ -2.17
TOP1P11387 Y_RNA.533-201ENST00000384596 114 ntBASIC1.51□□□□□ -2.17
TOP1P11387 MIR487A-201ENST00000385009 80 ntBASIC1.51□□□□□ -2.17
TOP1P11387 Y_RNA.594-201ENST00000410373 140 ntBASIC1.51□□□□□ -2.17
TOP1P11387 RNU6-1050P-201ENST00000410388 107 ntBASIC1.51□□□□□ -2.17
TOP1P11387 RPL37P10-201ENST00000412884 288 ntBASIC1.51□□□□□ -2.17
TOP1P11387 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP1P11387 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.51□□□□□ -2.17
TOP1P11387 AL139396.1-201ENST00000421137 167 ntBASIC1.51□□□□□ -2.17
TOP1P11387 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP1P11387 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP1P11387 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TOP1P11387 AC107399.1-201ENST00000451226 265 ntBASIC1.51□□□□□ -2.17
TOP1P11387 snoU13.6-201ENST00000458785 104 ntBASIC1.51□□□□□ -2.17
TOP1P11387 AC099513.1-201ENST00000490423 301 ntBASIC1.51□□□□□ -2.17
TOP1P11387 TRMT112P2-201ENST00000512910 132 ntBASIC1.51□□□□□ -2.17
TOP1P11387 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.51□□□□□ -2.17
TOP1P11387 RNU1-54P-201ENST00000517181 120 ntBASIC1.51□□□□□ -2.17
TOP1P11387 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.51□□□□□ -2.17
TOP1P11387 AC021231.3-201ENST00000558497 370 ntBASIC1.51□□□□□ -2.17
TOP1P11387 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TOP1P11387 MTND5P9-201ENST00000503854 1755 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNU6-414P-201ENST00000363705 104 ntBASIC1.5□□□□□ -2.17
TOP1P11387 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TOP1P11387 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
TOP1P11387 Y_RNA.529-201ENST00000384586 119 ntBASIC1.5□□□□□ -2.17
TOP1P11387 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TOP1P11387 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AC243428.1-201ENST00000421099 264 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.5□□□□□ -2.17
TOP1P11387 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.5□□□□□ -2.17
TOP1P11387 HMGN2P18-201ENST00000450680 270 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.5□□□□□ -2.17
TOP1P11387 HMGN1P13-201ENST00000505795 138 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNA5SP384-201ENST00000516615 116 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNU6-1016P-201ENST00000516689 94 ntBASIC1.5□□□□□ -2.17
TOP1P11387 Y_RNA.702-201ENST00000516843 96 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNA5SP490-201ENST00000517141 136 ntBASIC1.5□□□□□ -2.17
TOP1P11387 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AL160236.1-201ENST00000556317 195 ntBASIC1.5□□□□□ -2.17
TOP1P11387 CYP4A27P-201ENST00000567218 190 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AC005668.1-201ENST00000571142 476 ntBASIC1.5□□□□□ -2.17
TOP1P11387 MIR3923-201ENST00000579521 83 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AC009229.3-201ENST00000608056 282 ntBASIC1.5□□□□□ -2.17
TOP1P11387 AC099654.5-201ENST00000636479 350 ntBASIC1.5□□□□□ -2.17
TOP1P11387 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TOP1P11387 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-112P-201ENST00000363599 104 ntBASIC1.49□□□□□ -2.17
TOP1P11387 Y_RNA.263-201ENST00000364659 114 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-593P-201ENST00000364716 112 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-392P-201ENST00000364926 101 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-968P-201ENST00000384076 107 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-601P-201ENST00000384540 107 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-331P-201ENST00000384724 107 ntBASIC1.49□□□□□ -2.17
TOP1P11387 MIR1267-201ENST00000408723 78 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-1304P-201ENST00000411374 106 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RPS29P29-201ENST00000456396 171 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RPL7P42-201ENST00000481005 679 ntBASIC1.49□□□□□ -2.17
TOP1P11387 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.49□□□□□ -2.17
TOP1P11387 ACA59.1-201ENST00000515966 143 ntBASIC1.49□□□□□ -2.17
TOP1P11387 MIR449C-201ENST00000516047 92 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-1213P-201ENST00000517075 94 ntBASIC1.49□□□□□ -2.17
TOP1P11387 DEFB131C-201ENST00000528817 165 ntBASIC1.49□□□□□ -2.17
TOP1P11387 CBX3P8-201ENST00000532412 525 ntBASIC1.49□□□□□ -2.17
TOP1P11387 APOOP3-201ENST00000536787 586 ntBASIC1.49□□□□□ -2.17
TOP1P11387 AC109446.1-201ENST00000566172 220 ntBASIC1.49□□□□□ -2.17
TOP1P11387 SNORA77B-201ENST00000578179 125 ntBASIC1.49□□□□□ -2.17
TOP1P11387 RNU6-271P-201ENST00000363858 105 ntBASIC1.48□□□□□ -2.17
TOP1P11387 RNU6-595P-201ENST00000363944 107 ntBASIC1.48□□□□□ -2.17
TOP1P11387 SNORD116-29-201ENST00000384516 83 ntBASIC1.48□□□□□ -2.17
TOP1P11387 MIR549A-201ENST00000385268 96 ntBASIC1.48□□□□□ -2.17
TOP1P11387 SNORA75.4-201ENST00000391278 119 ntBASIC1.48□□□□□ -2.17
TOP1P11387 RNA5SP494-201ENST00000410653 129 ntBASIC1.48□□□□□ -2.17
TOP1P11387 SDAD1P3-201ENST00000427380 333 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.48□□□□□ -2.17
TOP1P11387 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.48□□□□□ -2.17
TOP1P11387 RPL30P10-201ENST00000488148 337 ntBASIC1.48□□□□□ -2.17
TOP1P11387 EIF4A1P12-201ENST00000551910 141 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AC068338.1-201ENST00000565567 176 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.48□□□□□ -2.17
TOP1P11387 AC113139.1-201ENST00000605049 239 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AC005014.2-201ENST00000607795 599 ntBASIC1.48□□□□□ -2.17
TOP1P11387 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.48□□□□□ -2.17
TOP1P11387 AC025253.1-201ENST00000613623 543 ntBASIC1.48□□□□□ -2.17
TOP1P11387 SCARNA4-201ENST00000629045 128 ntBASIC1.48□□□□□ -2.17
TOP1P11387 AC112487.2-201ENST00000637950 304 ntBASIC1.48□□□□□ -2.17
TOP1P11387 Y_RNA.4-201ENST00000362333 112 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RNU6-1188P-201ENST00000363795 107 ntBASIC1.47□□□□□ -2.17
TOP1P11387 U3.9-201ENST00000363823 204 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RNU6-1009P-201ENST00000390996 107 ntBASIC1.47□□□□□ -2.17
TOP1P11387 Y_RNA.646-201ENST00000410980 101 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RNU2-41P-201ENST00000410991 178 ntBASIC1.47□□□□□ -2.17
TOP1P11387 AC004866.1-201ENST00000411748 78 ntBASIC1.47□□□□□ -2.17
TOP1P11387 RPS26P42-201ENST00000413485 326 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms