Protein–RNA interactions for Protein: P08247

SYP, Synaptophysin, humanhuman

Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPP08247 AC010409.1-201ENST00000487382 476 ntBASIC3.24□□□□□ -1.89
SYPP08247 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
SYPP08247 RNU6-62P-201ENST00000516526 102 ntBASIC3.24□□□□□ -1.89
SYPP08247 RNU5F-4P-201ENST00000516581 114 ntBASIC3.24□□□□□ -1.89
SYPP08247 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
SYPP08247 RNU6-453P-201ENST00000516819 85 ntBASIC3.24□□□□□ -1.89
SYPP08247 AC022616.8-201ENST00000533569 253 ntBASIC3.24□□□□□ -1.89
SYPP08247 AC103810.1-201ENST00000579873 453 ntBASIC3.24□□□□□ -1.89
SYPP08247 AL137790.1-201ENST00000634283 177 ntBASIC3.24□□□□□ -1.89
SYPP08247 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.24□□□□□ -1.89
SYPP08247 AC007256.1-201ENST00000392253 2765 ntBASIC3.23□□□□□ -1.89
SYPP08247 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYPP08247 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SYPP08247 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SYPP08247 RNU6-1205P-201ENST00000363625 106 ntBASIC3.23□□□□□ -1.89
SYPP08247 Y_RNA.172-201ENST00000363765 102 ntBASIC3.23□□□□□ -1.89
SYPP08247 SNORA44-201ENST00000384584 132 ntBASIC3.23□□□□□ -1.89
SYPP08247 AL139095.1-201ENST00000404326 391 ntBASIC3.23□□□□□ -1.89
SYPP08247 RNU6-257P-201ENST00000410238 98 ntBASIC3.23□□□□□ -1.89
SYPP08247 AC009414.1-201ENST00000427200 443 ntBASIC3.23□□□□□ -1.89
SYPP08247 AC107083.1-201ENST00000439643 279 ntBASIC3.23□□□□□ -1.89
SYPP08247 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
SYPP08247 AC107027.2-201ENST00000512197 115 ntBASIC3.23□□□□□ -1.89
SYPP08247 RNA5SP272-201ENST00000516095 111 ntBASIC3.23□□□□□ -1.89
SYPP08247 MIR548X2-201ENST00000579776 100 ntBASIC3.23□□□□□ -1.89
SYPP08247 MIR5688-201ENST00000580619 83 ntBASIC3.23□□□□□ -1.89
SYPP08247 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYPP08247 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SYPP08247 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYPP08247 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
SYPP08247 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYPP08247 AC068647.1-201ENST00000489539 2265 ntBASIC3.22□□□□□ -1.89
SYPP08247 AL513302.2-201ENST00000562313 1842 ntBASIC3.22□□□□□ -1.89
SYPP08247 Y_RNA.124-201ENST00000363339 93 ntBASIC3.22□□□□□ -1.89
SYPP08247 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
SYPP08247 RNU6-417P-201ENST00000384712 107 ntBASIC3.22□□□□□ -1.89
SYPP08247 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SYPP08247 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.22□□□□□ -1.89
SYPP08247 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.22□□□□□ -1.89
SYPP08247 AC025750.2-201ENST00000442609 450 ntBASIC3.22□□□□□ -1.89
SYPP08247 RPS4XP2-201ENST00000458402 793 ntBASIC3.22□□□□□ -1.89
SYPP08247 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.22□□□□□ -1.89
SYPP08247 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.22□□□□□ -1.89
SYPP08247 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.22□□□□□ -1.89
SYPP08247 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.22□□□□□ -1.89
SYPP08247 MIR4765-201ENST00000585007 77 ntBASIC3.22□□□□□ -1.89
SYPP08247 AL391903.3-201ENST00000612158 163 ntBASIC3.22□□□□□ -1.89
SYPP08247 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.22□□□□□ -1.89
SYPP08247 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SYPP08247 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SYPP08247 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
SYPP08247 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
SYPP08247 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SYPP08247 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SYPP08247 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SYPP08247 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SYPP08247 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SYPP08247 SNORD50B-201ENST00000364995 70 ntBASIC3.21□□□□□ -1.9
SYPP08247 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SYPP08247 RNU6-1168P-201ENST00000390831 104 ntBASIC3.21□□□□□ -1.9
SYPP08247 RNU6-1154P-201ENST00000391001 104 ntBASIC3.21□□□□□ -1.9
SYPP08247 MIR873-201ENST00000401120 77 ntBASIC3.21□□□□□ -1.9
SYPP08247 AL355796.1-201ENST00000406706 323 ntBASIC3.21□□□□□ -1.9
SYPP08247 MIR1283-1-201ENST00000408494 87 ntBASIC3.21□□□□□ -1.9
SYPP08247 RPL23AP7-203ENST00000449021 469 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC245047.8-201ENST00000456455 284 ntBASIC3.21□□□□□ -1.9
SYPP08247 CENPBD1P1-201ENST00000464061 469 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.21□□□□□ -1.9
SYPP08247 RNA5SP112-201ENST00000515937 99 ntBASIC3.21□□□□□ -1.9
SYPP08247 RNU6-313P-201ENST00000516317 112 ntBASIC3.21□□□□□ -1.9
SYPP08247 RNU6-1007P-201ENST00000516586 107 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.21□□□□□ -1.9
SYPP08247 DNAJC19P2-201ENST00000593340 302 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC006023.1-201ENST00000603944 259 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
SYPP08247 AC009487.2-201ENST00000420969 6821 ntBASIC3.21□□□□□ -1.9
SYPP08247 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.21□□□□□ -1.9
SYPP08247 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.2□□□□□ -1.9
SYPP08247 AC100821.1-201ENST00000523153 2479 ntBASIC3.2□□□□□ -1.9
SYPP08247 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
SYPP08247 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYPP08247 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYPP08247 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SYPP08247 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SYPP08247 MIR30E-201ENST00000362104 92 ntBASIC3.2□□□□□ -1.9
SYPP08247 U8.7-201ENST00000364940 136 ntBASIC3.2□□□□□ -1.9
SYPP08247 RNU4-11P-201ENST00000365287 132 ntBASIC3.2□□□□□ -1.9
SYPP08247 RNU6-144P-201ENST00000383951 107 ntBASIC3.2□□□□□ -1.9
SYPP08247 SNORA22C-201ENST00000384614 134 ntBASIC3.2□□□□□ -1.9
SYPP08247 RNU6-376P-201ENST00000384731 106 ntBASIC3.2□□□□□ -1.9
SYPP08247 RNA5SP354-201ENST00000391247 136 ntBASIC3.2□□□□□ -1.9
SYPP08247 MIR300-201ENST00000401138 83 ntBASIC3.2□□□□□ -1.9
SYPP08247 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.2□□□□□ -1.9
SYPP08247 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.2□□□□□ -1.9
SYPP08247 MIR449C-201ENST00000516047 92 ntBASIC3.2□□□□□ -1.9
SYPP08247 MIR4474-201ENST00000579189 78 ntBASIC3.2□□□□□ -1.9
SYPP08247 RPL12P50-201ENST00000603116 116 ntBASIC3.2□□□□□ -1.9
SYPP08247 MIR3658-201ENST00000636291 56 ntBASIC3.2□□□□□ -1.9
SYPP08247 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms