Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.83□□□□□ -2.28
ERCC1P07992 AC022432.1-201ENST00000595739 310 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 AC106754.2-201ENST00000623006 233 ntBASIC0.83□□□□□ -2.28
ERCC1P07992 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
ERCC1P07992 Y_RNA.378-201ENST00000365652 113 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 Y_RNA.381-201ENST00000365666 102 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 MIR660-201ENST00000385235 97 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 SNORA12.1-201ENST00000390873 148 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 AL663109.1-201ENST00000411498 844 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.82□□□□□ -2.28
ERCC1P07992 RNU7-94P-201ENST00000459576 63 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 Y_RNA.654-201ENST00000497848 106 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 RNA5SP401-201ENST00000515920 127 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 RNU7-99P-201ENST00000516271 62 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 RNU7-128P-201ENST00000517247 62 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.82□□□□□ -2.28
ERCC1P07992 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.82□□□□□ -2.28
ERCC1P07992 AL118558.2-201ENST00000556294 238 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.82□□□□□ -2.28
ERCC1P07992 MTATP6P24-201ENST00000576835 677 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 AC087752.4-201ENST00000605911 462 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 AC007684.1-201ENST00000609671 477 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 U6.73-201ENST00000619194 103 ntBASIC0.82□□□□□ -2.28
ERCC1P07992 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.81□□□□□ -2.28
ERCC1P07992 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.81□□□□□ -2.28
ERCC1P07992 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 SNORD114-24-201ENST00000365029 72 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 RNU4-66P-201ENST00000365199 138 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 RNU6-38P-201ENST00000384085 107 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 MIR487A-201ENST00000385009 80 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.81□□□□□ -2.28
ERCC1P07992 MTCO2P16-201ENST00000436962 677 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 USP9YP29-201ENST00000445112 563 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 NDUFB4P10-201ENST00000452541 359 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 BET1P1-201ENST00000482276 359 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 RNA5SP168-201ENST00000516642 112 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 AC100830.2-201ENST00000581636 240 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 AC073648.5-201ENST00000603502 305 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.81□□□□□ -2.28
ERCC1P07992 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
ERCC1P07992 Y_RNA.1-201ENST00000352915 104 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 RNU6-1266P-201ENST00000362794 105 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 SNORD115-8-201ENST00000363856 82 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 SNORD115-38-201ENST00000365037 82 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.8□□□□□ -2.28
ERCC1P07992 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.8□□□□□ -2.28
ERCC1P07992 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.8□□□□□ -2.28
ERCC1P07992 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.8□□□□□ -2.28
ERCC1P07992 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.8□□□□□ -2.28
ERCC1P07992 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.8□□□□□ -2.28
ERCC1P07992 AC002429.1-201ENST00000437672 148 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 AC091885.1-201ENST00000506658 268 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 RNU6-1198P-201ENST00000516904 67 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 MIR151B-201ENST00000584249 96 ntBASIC0.8□□□□□ -2.28
ERCC1P07992 U3.8-201ENST00000363675 217 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 Y_RNA.796-201ENST00000364268 102 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 Y_RNA.799-201ENST00000364992 102 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 RNY1P14-201ENST00000384426 108 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 MIR653-201ENST00000385279 96 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
ERCC1P07992 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 MIR1185-2-201ENST00000408687 86 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.79□□□□□ -2.28
ERCC1P07992 SNORD124-201ENST00000459577 104 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 RPS3AP17-201ENST00000472594 777 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 PDCD5P2-201ENST00000507570 312 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.79□□□□□ -2.28
ERCC1P07992 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
ERCC1P07992 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.79□□□□□ -2.28
ERCC1P07992 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RNU6-199P-201ENST00000362954 107 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 Y_RNA.124-201ENST00000363339 93 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 Y_RNA.296-201ENST00000364930 108 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 MIR520E-201ENST00000384867 87 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RNU11-5P-201ENST00000391216 129 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 EIF4E2P1-201ENST00000393781 255 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RNU2-64P-201ENST00000411315 191 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.78□□□□□ -2.28
ERCC1P07992 RPS4XP11-201ENST00000446897 772 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RNU6-1208P-201ENST00000459588 107 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RPS29P1-201ENST00000465274 159 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 RNU6-1223P-201ENST00000517124 104 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC016957.1-201ENST00000534895 309 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC090049.2-201ENST00000550377 109 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC013244.2-201ENST00000603396 103 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 SNORA28-201ENST00000606769 126 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC092807.2-201ENST00000609367 243 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC017083.3-201ENST00000609955 700 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC073114.1-201ENST00000612027 490 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
ERCC1P07992 AC018630.2-201ENST00000534866 2403 ntBASIC0.77□□□□□ -2.29
ERCC1P07992 AP000568.1-201ENST00000282964 442 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms