Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.12□□□□□ -2.07
COL2A1P02458 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL2A1P02458 RPS29P12-201ENST00000460178 152 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 AL160314.1-201ENST00000490836 438 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 RNU6-406P-201ENST00000516470 107 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 RNU6-861P-201ENST00000516745 106 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 RN7SKP40-201ENST00000517211 242 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.12□□□□□ -2.07
COL2A1P02458 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 SNRPGP15-201ENST00000600149 222 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.12□□□□□ -2.07
COL2A1P02458 AC090132.2-201ENST00000615881 347 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 MIR6779-201ENST00000617283 64 ntBASIC2.12□□□□□ -2.07
COL2A1P02458 LINC02555-201ENST00000563933 1951 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.11□□□□□ -2.07
COL2A1P02458 AC233981.2-201ENST00000611524 1614 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 DEFB108F-201ENST00000344638 222 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RNU6-227P-201ENST00000362865 103 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 Y_RNA.199-201ENST00000364014 102 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 Y_RNA.352-201ENST00000365439 102 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RNU6-898P-201ENST00000365627 104 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 SNORA40C-201ENST00000391285 128 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 PCNPP3-201ENST00000393579 471 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RPL19P1-201ENST00000411635 428 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AC016700.2-201ENST00000446011 156 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.11□□□□□ -2.07
COL2A1P02458 Y_RNA.644-201ENST00000459006 113 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RPL23AP75-201ENST00000491601 451 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.11□□□□□ -2.07
COL2A1P02458 SNORD116-28-201ENST00000516123 91 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 Y_RNA.674-201ENST00000516362 113 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RNU6-911P-201ENST00000516523 104 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 RNU5B-3P-201ENST00000516601 115 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 SNORA31.18-201ENST00000517043 134 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.11□□□□□ -2.07
COL2A1P02458 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.11□□□□□ -2.07
COL2A1P02458 SNORD84-203ENST00000584275 78 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AL078605.1-201ENST00000603529 500 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 Y_RNA.772-201ENST00000606692 102 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 AC127459.3-201ENST00000624328 466 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 MIR4275-201ENST00000636486 87 ntBASIC2.11□□□□□ -2.07
COL2A1P02458 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL2A1P02458 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.11□□□□□ -2.07
COL2A1P02458 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.11□□□□□ -2.07
COL2A1P02458 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL2A1P02458 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL2A1P02458 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL2A1P02458 RNA5SP361-201ENST00000362686 118 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RNU6-1301P-201ENST00000362724 104 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RNU6-740P-201ENST00000364734 105 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 Y_RNA.785-201ENST00000384290 109 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RNU6-843P-201ENST00000384454 104 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RPS29P13-201ENST00000402041 169 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.1□□□□□ -2.07
COL2A1P02458 AC009296.1-201ENST00000443146 155 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AL031659.1-201ENST00000447075 539 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AL137159.1-201ENST00000452808 512 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RPL23AP3-201ENST00000453844 468 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 snoU13.30-201ENST00000458951 104 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.1□□□□□ -2.07
COL2A1P02458 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 SNORA70.16-201ENST00000516390 95 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 RNU6-789P-201ENST00000517105 102 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.1□□□□□ -2.07
COL2A1P02458 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.1□□□□□ -2.07
COL2A1P02458 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.1□□□□□ -2.07
COL2A1P02458 UBL5P4-201ENST00000562584 236 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 MIR3910-1-201ENST00000580936 111 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AL049779.4-201ENST00000604500 156 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 AC021753.1-201ENST00000635724 168 ntBASIC2.1□□□□□ -2.07
COL2A1P02458 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
COL2A1P02458 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
COL2A1P02458 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL2A1P02458 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL2A1P02458 MIR335-201ENST00000362173 94 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-545P-201ENST00000362681 104 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-78P-201ENST00000362897 107 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 Y_RNA.180-201ENST00000363867 113 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-923P-201ENST00000364753 107 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-318P-201ENST00000384283 103 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 Y_RNA.506-201ENST00000384494 102 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-125P-201ENST00000384505 107 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 Y_RNA.555-201ENST00000384673 110 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 BTF3L4P2-201ENST00000392798 346 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 MTCYBP2-201ENST00000407745 171 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU2-71P-201ENST00000411395 189 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AL078601.1-201ENST00000444542 271 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AC009237.7-201ENST00000447357 229 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AL138752.1-201ENST00000452964 351 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 HSPE1P25-201ENST00000455484 251 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AL121594.1-201ENST00000475906 575 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 MIR449C-201ENST00000516047 92 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 RNU6-1012P-201ENST00000516606 109 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AP002392.1-201ENST00000537692 208 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.09□□□□□ -2.07
COL2A1P02458 BX284668.6-201ENST00000606899 438 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AC104465.1-201ENST00000611365 139 ntBASIC2.09□□□□□ -2.07
COL2A1P02458 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms