Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL450472.1-202ENST00000637286 180 ntBASIC2.29□□□□□ -2.04
LDLRP01130 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDLRP01130 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDLRP01130 AC233981.2-201ENST00000611524 1614 ntBASIC2.28□□□□□ -2.04
LDLRP01130 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDLRP01130 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDLRP01130 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.04
LDLRP01130 MIRLET7G-201ENST00000362280 84 ntBASIC2.28□□□□□ -2.04
LDLRP01130 SNORA20.1-201ENST00000364790 130 ntBASIC2.28□□□□□ -2.04
LDLRP01130 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
LDLRP01130 SNORA29-201ENST00000384183 140 ntBASIC2.28□□□□□ -2.04
LDLRP01130 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
LDLRP01130 EIF1AXP1-201ENST00000419267 435 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.28□□□□□ -2.04
LDLRP01130 Z82188.1-201ENST00000436709 154 ntBASIC2.28□□□□□ -2.04
LDLRP01130 MTND2P29-201ENST00000438595 412 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.28□□□□□ -2.04
LDLRP01130 snoU13.6-201ENST00000458785 104 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC067942.3-201ENST00000512025 362 ntBASIC2.28□□□□□ -2.04
LDLRP01130 RNU6-586P-201ENST00000517265 104 ntBASIC2.28□□□□□ -2.04
LDLRP01130 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.28□□□□□ -2.04
LDLRP01130 AC021231.3-201ENST00000558497 370 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC104581.2-201ENST00000572227 430 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC136932.1-201ENST00000574771 208 ntBASIC2.28□□□□□ -2.04
LDLRP01130 MIR1273D-201ENST00000577266 86 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC010928.2-201ENST00000588017 287 ntBASIC2.28□□□□□ -2.04
LDLRP01130 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.28□□□□□ -2.04
LDLRP01130 AL355297.2-201ENST00000604792 129 ntBASIC2.28□□□□□ -2.04
LDLRP01130 SNORD14A-201ENST00000606526 91 ntBASIC2.28□□□□□ -2.04
LDLRP01130 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
LDLRP01130 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LDLRP01130 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
LDLRP01130 Y_RNA.20-201ENST00000362479 113 ntBASIC2.27□□□□□ -2.05
LDLRP01130 Y_RNA.27-201ENST00000362540 103 ntBASIC2.27□□□□□ -2.05
LDLRP01130 SNORD114-1-201ENST00000362705 72 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNU1-76P-201ENST00000362903 159 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNU4-56P-201ENST00000364700 142 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNU6-209P-201ENST00000384118 107 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNU4-70P-201ENST00000384579 139 ntBASIC2.27□□□□□ -2.05
LDLRP01130 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
LDLRP01130 SNORD115-46-201ENST00000390982 71 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AL590556.1-201ENST00000423231 483 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AC107032.1-201ENST00000485945 480 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AC132942.1-201ENST00000486753 483 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.27□□□□□ -2.05
LDLRP01130 RN7SL636P-201ENST00000497504 294 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNU6-138P-201ENST00000515952 107 ntBASIC2.27□□□□□ -2.05
LDLRP01130 RNA5SP458-201ENST00000516188 119 ntBASIC2.27□□□□□ -2.05
LDLRP01130 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.27□□□□□ -2.05
LDLRP01130 AL442163.3-201ENST00000554110 156 ntBASIC2.27□□□□□ -2.05
LDLRP01130 AC026470.2-201ENST00000561492 181 ntBASIC2.27□□□□□ -2.05
LDLRP01130 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.27□□□□□ -2.05
LDLRP01130 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.27□□□□□ -2.05
LDLRP01130 MIR203B-201ENST00000636080 86 ntBASIC2.27□□□□□ -2.05
LDLRP01130 U6.92-201ENST00000636464 89 ntBASIC2.27□□□□□ -2.05
LDLRP01130 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LDLRP01130 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
LDLRP01130 RNU4-15P-201ENST00000362613 141 ntBASIC2.26□□□□□ -2.05
LDLRP01130 Y_RNA.237-201ENST00000364439 102 ntBASIC2.26□□□□□ -2.05
LDLRP01130 RNU6-1286P-201ENST00000383871 107 ntBASIC2.26□□□□□ -2.05
LDLRP01130 RNU6-338P-201ENST00000383888 105 ntBASIC2.26□□□□□ -2.05
LDLRP01130 Y_RNA.416-201ENST00000384014 113 ntBASIC2.26□□□□□ -2.05
LDLRP01130 RNU6-1274P-201ENST00000384557 107 ntBASIC2.26□□□□□ -2.05
LDLRP01130 MIR628-201ENST00000385229 95 ntBASIC2.26□□□□□ -2.05
LDLRP01130 SNORD58.1-201ENST00000391313 66 ntBASIC2.26□□□□□ -2.05
LDLRP01130 RNU2-63P-201ENST00000410792 194 ntBASIC2.26□□□□□ -2.05
LDLRP01130 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LDLRP01130 SDAD1P3-201ENST00000427380 333 ntBASIC2.26□□□□□ -2.05
LDLRP01130 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.26□□□□□ -2.05
LDLRP01130 RN7SKP210-201ENST00000459176 261 ntBASIC2.26□□□□□ -2.05
LDLRP01130 AC145146.1-201ENST00000496370 254 ntBASIC2.26□□□□□ -2.05
LDLRP01130 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.26□□□□□ -2.05
LDLRP01130 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.26□□□□□ -2.05
LDLRP01130 MIR4300-201ENST00000581016 96 ntBASIC2.26□□□□□ -2.05
LDLRP01130 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
LDLRP01130 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
LDLRP01130 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.26□□□□□ -2.05
LDLRP01130 AC007336.1-201ENST00000576365 3828 ntBASIC2.25□□□□□ -2.05
LDLRP01130 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.25□□□□□ -2.05
LDLRP01130 ZNF720P1-201ENST00000562403 1939 ntBASIC2.25□□□□□ -2.05
LDLRP01130 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.25□□□□□ -2.05
LDLRP01130 SNORA3A-201ENST00000364113 130 ntBASIC2.25□□□□□ -2.05
LDLRP01130 RNU6-200P-201ENST00000364743 107 ntBASIC2.25□□□□□ -2.05
LDLRP01130 Y_RNA.478-201ENST00000384358 107 ntBASIC2.25□□□□□ -2.05
LDLRP01130 SNORA12-201ENST00000391162 147 ntBASIC2.25□□□□□ -2.05
LDLRP01130 MTCYBP2-201ENST00000407745 171 ntBASIC2.25□□□□□ -2.05
LDLRP01130 Y_RNA.597-201ENST00000410463 100 ntBASIC2.25□□□□□ -2.05
LDLRP01130 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LDLRP01130 AC012306.1-201ENST00000423267 114 ntBASIC2.25□□□□□ -2.05
LDLRP01130 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.25□□□□□ -2.05
LDLRP01130 CYP2C59P-201ENST00000457790 269 ntBASIC2.25□□□□□ -2.05
LDLRP01130 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.25□□□□□ -2.05
LDLRP01130 MIR3923-201ENST00000579521 83 ntBASIC2.25□□□□□ -2.05
LDLRP01130 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
LDLRP01130 AC012640.5-201ENST00000623897 319 ntBASIC2.25□□□□□ -2.05
LDLRP01130 AC069528.2-201ENST00000624849 1991 ntBASIC2.25□□□□□ -2.05
LDLRP01130 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LDLRP01130 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LDLRP01130 MIR335-201ENST00000362173 94 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms