Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-1016P-201ENST00000516689 94 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.72□□□□□ -2.13
PDGFBP01127 AC012493.3-201ENST00000604494 112 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 AC018462.2-201ENST00000605375 395 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.72□□□□□ -2.13
PDGFBP01127 AC006026.1-201ENST00000444025 1803 ntBASIC1.72□□□□□ -2.13
PDGFBP01127 SNORD114-26-201ENST00000363543 72 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 RNU6-60P-201ENST00000364792 103 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 RNU4-9P-201ENST00000364951 139 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
PDGFBP01127 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PDGFBP01127 RNA5SP338-201ENST00000410495 85 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 AC016717.1-201ENST00000448918 286 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.71□□□□□ -2.14
PDGFBP01127 SNORA20.3-201ENST00000516880 132 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.71□□□□□ -2.14
PDGFBP01127 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.71□□□□□ -2.14
PDGFBP01127 SNORD53B-201ENST00000577887 78 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 MIR4801-201ENST00000582704 82 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 MIR3935-201ENST00000583472 104 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 AC005520.5-201ENST00000613926 164 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 DUXAP9-208ENST00000622815 614 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 SCARNA4-201ENST00000629045 128 ntBASIC1.71□□□□□ -2.14
PDGFBP01127 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
PDGFBP01127 RNU6-222P-201ENST00000362438 107 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 Y_RNA.132-201ENST00000363421 102 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 RNU6-1305P-201ENST00000364353 104 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 Y_RNA.339-201ENST00000365325 102 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 RNU6-53P-201ENST00000365367 106 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SNORA75.4-201ENST00000391278 119 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
PDGFBP01127 RNU6-174P-201ENST00000410406 106 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 RNU6-370P-201ENST00000411008 104 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AC004866.1-201ENST00000411748 78 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.7□□□□□ -2.14
PDGFBP01127 SNORD5.1-201ENST00000458800 75 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 RNU7-175P-201ENST00000515915 61 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 RNVU1-2-201ENST00000516326 135 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SNORA25.14-201ENST00000516481 132 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SCARNA16.2-201ENST00000516520 172 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 Y_RNA.708-201ENST00000516950 96 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SUMO2P18-201ENST00000518873 252 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.7□□□□□ -2.14
PDGFBP01127 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.7□□□□□ -2.14
PDGFBP01127 AC015720.1-201ENST00000565251 277 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AL355802.3-201ENST00000607571 545 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AL355073.2-201ENST00000612106 557 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 AL157834.3-201ENST00000615543 103 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.7□□□□□ -2.14
PDGFBP01127 Y_RNA.142-201ENST00000363491 102 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 SNORD31B-201ENST00000364977 69 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 Y_RNA.319-201ENST00000365138 92 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 HSPE1P21-201ENST00000438283 308 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 RPL30P15-201ENST00000457129 321 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.69□□□□□ -2.14
PDGFBP01127 RN7SL274P-201ENST00000492268 272 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 AL590705.4-201ENST00000532209 134 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.69□□□□□ -2.14
PDGFBP01127 RRN3P3-201ENST00000549207 578 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 AL121579.1-201ENST00000555129 305 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 SUB1P4-201ENST00000566062 339 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 MIR5695-201ENST00000579717 85 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
PDGFBP01127 AC136443.5-201ENST00000603741 370 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 TCL6_2.1-201ENST00000615162 119 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 AC022306.2-201ENST00000617563 647 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 MTND4LP32-201ENST00000636111 270 ntBASIC1.69□□□□□ -2.14
PDGFBP01127 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
PDGFBP01127 ZNF299P-201ENST00000406845 1804 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 Y_RNA.356-201ENST00000365475 113 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 Y_RNA.482-201ENST00000384377 111 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 MIR153-2-201ENST00000385225 87 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC092423.1-201ENST00000430165 186 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.68□□□□□ -2.14
PDGFBP01127 Y_RNA.635-201ENST00000459041 101 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.68□□□□□ -2.14
PDGFBP01127 AC025465.3-201ENST00000510570 311 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 RNU6-58P-201ENST00000517143 103 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC105029.1-201ENST00000520250 669 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.68□□□□□ -2.14
PDGFBP01127 MIR548S-201ENST00000581352 82 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 MIR4753-201ENST00000585119 83 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 SNRPGP20-201ENST00000604477 205 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC083806.3-201ENST00000614016 455 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC022709.1-201ENST00000615967 87 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC091895.1-201ENST00000624494 256 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AL359697.1-201ENST00000624879 587 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AC099654.5-201ENST00000636479 350 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 AL669831.3-213ENST00000636676 183 ntBASIC1.68□□□□□ -2.14
PDGFBP01127 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms