Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RNU6-18P-201ENST00000384527 107 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 Y_RNA.524-201ENST00000384564 100 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 Y_RNA.561-201ENST00000384694 100 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU6-417P-201ENST00000384712 107 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 MIR548B-201ENST00000385247 97 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 SNORA67.6-201ENST00000391093 99 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU1-78P-201ENST00000391248 165 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 MIR1323-201ENST00000408090 73 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU6-174P-201ENST00000410406 106 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 FCF1P9-201ENST00000412546 282 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 CST2P1-201ENST00000425770 87 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 AC074290.1-201ENST00000448883 135 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU6-329P-201ENST00000459618 107 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RPL36AP21-201ENST00000490372 323 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU7-175P-201ENST00000515915 61 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 RNU6-1198P-201ENST00000516904 67 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 AF235103.2-201ENST00000525753 346 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.39□□□□□ -2.19
TRIM3O75382 SNORD11B-201ENST00000607707 90 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.39□□□□□ -2.19
TRIM3O75382 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
TRIM3O75382 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
TRIM3O75382 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
TRIM3O75382 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM3O75382 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
TRIM3O75382 snoU2-30.2-201ENST00000362805 70 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 RNU6-414P-201ENST00000363705 104 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 Y_RNA.415-201ENST00000384012 112 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 RNU6-245P-201ENST00000384020 107 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 RNU6-159P-201ENST00000391080 106 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 AL356776.1-201ENST00000406574 447 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 MIR1253-201ENST00000408273 105 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 EBAG9P1-201ENST00000418955 543 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 AL139396.1-201ENST00000421137 167 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 EIF1P1-201ENST00000421436 341 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 AP000870.1-201ENST00000472927 406 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 MTND5P5-201ENST00000503764 376 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 CBX3P8-201ENST00000532412 525 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 MIR4742-201ENST00000581069 85 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 BNIP3P10-201ENST00000605360 577 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 AL353149.1-201ENST00000610667 244 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM3O75382 AC008873.1-201ENST00000625051 138 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 snoZ196.1-201ENST00000625269 89 ntBASIC1.38□□□□□ -2.19
TRIM3O75382 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
TRIM3O75382 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.38□□□□□ -2.19
TRIM3O75382 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM3O75382 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM3O75382 AC100821.1-201ENST00000523153 2479 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
TRIM3O75382 RNU6-271P-201ENST00000363858 105 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 RNU6-595P-201ENST00000363944 107 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 RNU4-13P-201ENST00000364019 141 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 Y_RNA.287-201ENST00000364853 94 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 RNU6-596P-201ENST00000365395 98 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 RNU6-510P-201ENST00000391239 108 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 MIR1267-201ENST00000408723 78 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 AC016909.1-201ENST00000415916 166 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM3O75382 AC073910.1-201ENST00000445047 438 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM3O75382 AC091179.3-201ENST00000474761 144 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 AC103851.1-201ENST00000506833 274 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM3O75382 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.37□□□□□ -2.19
TRIM3O75382 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.37□□□□□ -2.19
TRIM3O75382 AC095038.3-201ENST00000634439 195 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 ZNF299P-201ENST00000406845 1804 ntBASIC1.37□□□□□ -2.19
TRIM3O75382 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 SNORA63D-201ENST00000364359 132 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RNU6-331P-201ENST00000384724 107 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RNU6-192P-201ENST00000391253 100 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RNA5SP467-201ENST00000391274 118 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 MIR548F5-201ENST00000408421 86 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 SNORD5.1-201ENST00000458800 75 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RN7SKP210-201ENST00000459176 261 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 RPL26P26-201ENST00000480251 434 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AC018710.1-201ENST00000506509 158 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AC025647.1-201ENST00000517879 253 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.36□□□□□ -2.19
TRIM3O75382 AK6P2-201ENST00000549020 471 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AC008269.2-201ENST00000561915 1105 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.36□□□□□ -2.19
TRIM3O75382 MIR5695-201ENST00000579717 85 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 MZT1P2-201ENST00000604387 248 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AL355802.3-201ENST00000607571 545 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
TRIM3O75382 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TRIM3O75382 MIR8063-201ENST00000621930 81 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms