Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RNU6-1069P-201ENST00000516612 133 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 MIR5695-201ENST00000579717 85 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AC025449.1-201ENST00000603896 529 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.66□□□□□ -2.3
SHOX2O60902 MIR8054-201ENST00000620877 86 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AL078596.1-201ENST00000624856 447 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 AC008873.1-201ENST00000625051 138 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 snoZ196.1-201ENST00000625269 89 ntBASIC0.66□□□□□ -2.3
SHOX2O60902 RNU6-1240P-201ENST00000365155 104 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 RNU6-1286P-201ENST00000383871 107 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 SNORA2A-201ENST00000383885 135 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 RNU5A-2P-201ENST00000384337 116 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SHOX2O60902 AL031577.2-201ENST00000404133 280 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC114482.1-201ENST00000418010 247 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.65□□□□□ -2.31
SHOX2O60902 AC002429.1-201ENST00000437672 148 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AL606517.2-201ENST00000442855 241 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 MTCO3P8-201ENST00000453691 755 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 U8.21-201ENST00000459536 136 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC048334.1-201ENST00000477975 159 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.65□□□□□ -2.31
SHOX2O60902 SNORD79.1-201ENST00000516069 84 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 RNU6-496P-201ENST00000516145 99 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 SNORA62.5-201ENST00000516634 120 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC090142.3-201ENST00000519012 385 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 RNU6-323P-201ENST00000521915 107 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.65□□□□□ -2.31
SHOX2O60902 AP003484.1-201ENST00000530974 250 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AL512605.2-201ENST00000592972 256 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
SHOX2O60902 AC068790.6-201ENST00000602558 258 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 AC068787.1-201ENST00000623908 691 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 SNORD3E-202ENST00000627253 216 ntBASIC0.65□□□□□ -2.31
SHOX2O60902 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNA5SP347-201ENST00000362445 119 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNU4-76P-201ENST00000364509 141 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNU6-517P-201ENST00000384362 110 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 SNORA80D-201ENST00000384488 135 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 Y_RNA.571-201ENST00000384753 98 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 MRPL42P3-201ENST00000401492 326 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 MIR1468-201ENST00000410600 86 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 TIMM9P3-201ENST00000428659 274 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC245047.3-201ENST00000429428 127 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.64□□□□□ -2.31
SHOX2O60902 AL356010.1-201ENST00000456364 102 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNU6-221P-201ENST00000459541 99 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 SNORD124-201ENST00000459577 104 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 SNORD42A-201ENST00000459584 64 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNU6-1129P-201ENST00000515964 104 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 RNU6-922P-201ENST00000516753 99 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 SNORA18.6-201ENST00000516792 115 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC025647.1-201ENST00000517879 253 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AL590705.4-201ENST00000532209 134 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AL121579.1-201ENST00000555129 305 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC004584.2-201ENST00000570407 410 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC022217.4-201ENST00000604389 163 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC097065.2-201ENST00000608159 533 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC016597.2-201ENST00000613256 341 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC073349.3-201ENST00000617616 186 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC137590.2-201ENST00000619709 240 ntBASIC0.64□□□□□ -2.31
SHOX2O60902 AC073544.1-201ENST00000600110 1595 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 Y_RNA.124-201ENST00000363339 93 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 Y_RNA.560-201ENST00000384689 102 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 MIR660-201ENST00000385235 97 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SHOX2O60902 RNA5SP266-201ENST00000410273 108 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 MTATP6P19-201ENST00000413797 659 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 MTCO2P34-201ENST00000421994 607 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.63□□□□□ -2.31
SHOX2O60902 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.63□□□□□ -2.31
SHOX2O60902 RPS29P27-201ENST00000463711 170 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 AC025465.4-201ENST00000513422 638 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 AC007834.2-201ENST00000536310 343 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 AC009229.3-201ENST00000608056 282 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 U6.108-201ENST00000637764 58 ntBASIC0.63□□□□□ -2.31
SHOX2O60902 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
SHOX2O60902 Y_RNA.457-201ENST00000384237 111 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 RNU6-440P-201ENST00000390882 105 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 RNU6-903P-201ENST00000391270 109 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 AC004866.1-201ENST00000411748 78 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 RPS3AP1-201ENST00000413190 320 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 AC016909.1-201ENST00000415916 166 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 MTND4P32-201ENST00000437189 1237 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.62□□□□□ -2.31
SHOX2O60902 RNU7-94P-201ENST00000459576 63 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 RNU6-344P-201ENST00000516635 111 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SHOX2O60902 FGF7P1-201ENST00000582820 288 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 AL357312.1-201ENST00000603879 298 ntBASIC0.62□□□□□ -2.31
SHOX2O60902 RNU6-181P-201ENST00000363225 107 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 RNU6-282P-201ENST00000365357 103 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 Y_RNA.572-201ENST00000384757 98 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 MIR653-201ENST00000385279 96 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.61□□□□□ -2.31
SHOX2O60902 RPS20P10-201ENST00000451209 253 ntBASIC0.61□□□□□ -2.31
SHOX2O60902 RPL39P39-201ENST00000455840 151 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms