Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC105758.1-201ENST00000506038 399 ntBASIC1.75□□□□□ -2.13
SNX3O60493 AC107393.1-201ENST00000512403 346 ntBASIC1.75□□□□□ -2.13
SNX3O60493 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.75□□□□□ -2.13
SNX3O60493 AC022868.1-201ENST00000517767 391 ntBASIC1.75□□□□□ -2.13
SNX3O60493 SUB1P4-201ENST00000566062 339 ntBASIC1.75□□□□□ -2.13
SNX3O60493 AL109918.3-201ENST00000603072 338 ntBASIC1.75□□□□□ -2.13
SNX3O60493 AC133104.2-201ENST00000615272 193 ntBASIC1.75□□□□□ -2.13
SNX3O60493 AC087588.2-201ENST00000617667 426 ntBASIC1.75□□□□□ -2.13
SNX3O60493 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.75□□□□□ -2.13
SNX3O60493 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNX3O60493 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNX3O60493 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.74□□□□□ -2.13
SNX3O60493 U3.8-201ENST00000363675 217 ntBASIC1.74□□□□□ -2.13
SNX3O60493 RNU6-879P-201ENST00000364328 108 ntBASIC1.74□□□□□ -2.13
SNX3O60493 SNORA64-201ENST00000384674 134 ntBASIC1.74□□□□□ -2.13
SNX3O60493 RNA5SP212-201ENST00000391223 107 ntBASIC1.74□□□□□ -2.13
SNX3O60493 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNX3O60493 AL117342.1-201ENST00000404861 406 ntBASIC1.74□□□□□ -2.13
SNX3O60493 RNA5SP100-201ENST00000410903 110 ntBASIC1.74□□□□□ -2.13
SNX3O60493 RNA5SP59-201ENST00000410922 110 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AC016909.1-201ENST00000415916 166 ntBASIC1.74□□□□□ -2.13
SNX3O60493 MRPS18CP6-201ENST00000423587 223 ntBASIC1.74□□□□□ -2.13
SNX3O60493 RPL23AP6-201ENST00000446637 472 ntBASIC1.74□□□□□ -2.13
SNX3O60493 NDUFB4P10-201ENST00000452541 359 ntBASIC1.74□□□□□ -2.13
SNX3O60493 SNORD19B-201ENST00000459623 84 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.74□□□□□ -2.13
SNX3O60493 MTND3P22-201ENST00000510932 243 ntBASIC1.74□□□□□ -2.13
SNX3O60493 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.74□□□□□ -2.13
SNX3O60493 DEFB122-202ENST00000569013 197 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.74□□□□□ -2.13
SNX3O60493 AC005034.5-201ENST00000604219 466 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AL627230.6-201ENST00000611129 280 ntBASIC1.74□□□□□ -2.13
SNX3O60493 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.74□□□□□ -2.13
SNX3O60493 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.74□□□□□ -2.13
SNX3O60493 AL357075.2-201ENST00000614906 189 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AC126177.8-201ENST00000618339 1015 ntBASIC1.74□□□□□ -2.13
SNX3O60493 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.74□□□□□ -2.13
SNX3O60493 AC091932.3-201ENST00000624223 323 ntBASIC1.74□□□□□ -2.13
SNX3O60493 MIR219B-201ENST00000637023 88 ntBASIC1.74□□□□□ -2.13
SNX3O60493 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.74□□□□□ -2.13
SNX3O60493 RNU4-73P-201ENST00000363164 141 ntBASIC1.73□□□□□ -2.13
SNX3O60493 RNU6-1145P-201ENST00000384246 107 ntBASIC1.73□□□□□ -2.13
SNX3O60493 RNU6-318P-201ENST00000384283 103 ntBASIC1.73□□□□□ -2.13
SNX3O60493 MIR625-201ENST00000385047 85 ntBASIC1.73□□□□□ -2.13
SNX3O60493 MIR559-201ENST00000385188 96 ntBASIC1.73□□□□□ -2.13
SNX3O60493 MTCO2P27-201ENST00000420740 428 ntBASIC1.73□□□□□ -2.13
SNX3O60493 AL356320.1-201ENST00000429616 163 ntBASIC1.73□□□□□ -2.13
SNX3O60493 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
SNX3O60493 RNU6-221P-201ENST00000459541 99 ntBASIC1.73□□□□□ -2.13
SNX3O60493 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SNX3O60493 AC025647.1-201ENST00000517879 253 ntBASIC1.73□□□□□ -2.13
SNX3O60493 AC091144.1-201ENST00000519573 138 ntBASIC1.73□□□□□ -2.13
SNX3O60493 LARP7P1-201ENST00000605576 316 ntBASIC1.73□□□□□ -2.13
SNX3O60493 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.73□□□□□ -2.13
SNX3O60493 MIR338-201ENST00000636369 67 ntBASIC1.73□□□□□ -2.13
SNX3O60493 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.73□□□□□ -2.13
SNX3O60493 RNU1-96P-201ENST00000364163 162 ntBASIC1.72□□□□□ -2.13
SNX3O60493 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
SNX3O60493 MIR1185-2-201ENST00000408687 86 ntBASIC1.72□□□□□ -2.13
SNX3O60493 Y_RNA.595-201ENST00000410403 105 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC009310.1-201ENST00000414414 451 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC114482.1-201ENST00000418010 247 ntBASIC1.72□□□□□ -2.13
SNX3O60493 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
SNX3O60493 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX3O60493 UBE2V1P7-201ENST00000446395 340 ntBASIC1.72□□□□□ -2.13
SNX3O60493 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX3O60493 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.72□□□□□ -2.13
SNX3O60493 AC010409.1-201ENST00000487382 476 ntBASIC1.72□□□□□ -2.13
SNX3O60493 HMGB3P17-201ENST00000504195 649 ntBASIC1.72□□□□□ -2.13
SNX3O60493 RNU6-107P-201ENST00000516643 102 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
SNX3O60493 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.72□□□□□ -2.13
SNX3O60493 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
SNX3O60493 MIR4795-201ENST00000584182 89 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC080078.3-201ENST00000605407 463 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AL353149.1-201ENST00000610667 244 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC073544.1-201ENST00000600110 1595 ntBASIC1.72□□□□□ -2.13
SNX3O60493 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SNX3O60493 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SNX3O60493 snoU2-30.2-201ENST00000362805 70 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNU6-490P-201ENST00000362985 107 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNY3P11-201ENST00000364153 102 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNU6-1040P-201ENST00000383974 107 ntBASIC1.71□□□□□ -2.14
SNX3O60493 MIR676-201ENST00000390702 67 ntBASIC1.71□□□□□ -2.14
SNX3O60493 SNORA69.1-201ENST00000390904 137 ntBASIC1.71□□□□□ -2.14
SNX3O60493 Y_RNA.592-201ENST00000410274 109 ntBASIC1.71□□□□□ -2.14
SNX3O60493 AF228730.4-201ENST00000421457 183 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RPL31P63-201ENST00000422565 375 ntBASIC1.71□□□□□ -2.14
SNX3O60493 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.71□□□□□ -2.14
SNX3O60493 HMGN2P34-201ENST00000437647 269 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNU7-152P-201ENST00000458982 64 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RPL23AP42-201ENST00000471152 471 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
SNX3O60493 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RN7SKP49-201ENST00000516675 260 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RNU6-699P-201ENST00000517081 110 ntBASIC1.71□□□□□ -2.14
SNX3O60493 RAB11AP2-201ENST00000545905 639 ntBASIC1.71□□□□□ -2.14
SNX3O60493 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.71□□□□□ -2.14
SNX3O60493 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms