Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 Y_RNA.580-201ENST00000391004 95 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 RPS27AP9-201ENST00000477681 438 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 PDCD5P2-201ENST00000507570 312 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 RNU6-966P-201ENST00000516479 104 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.65□□□□□ -1.83
GRIN3BO60391 SNORD11B-201ENST00000607707 90 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 MIR6817-201ENST00000615588 66 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 AC073349.3-201ENST00000617616 186 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 AC092593.1-201ENST00000515413 1815 ntBASIC3.65□□□□□ -1.83
GRIN3BO60391 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
GRIN3BO60391 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GRIN3BO60391 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GRIN3BO60391 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GRIN3BO60391 RNU6-727P-201ENST00000363592 107 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 MIR592-201ENST00000384959 97 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 MIR9-1-201ENST00000385198 89 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GRIN3BO60391 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.64□□□□□ -1.83
GRIN3BO60391 AC009237.7-201ENST00000447357 229 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AL031183.1-201ENST00000457667 207 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AC145146.1-201ENST00000496370 254 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.64□□□□□ -1.83
GRIN3BO60391 RNA5SP272-201ENST00000516095 111 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 RNY3P16-201ENST00000516338 101 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 AP002001.1-203ENST00000534002 267 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.64□□□□□ -1.83
GRIN3BO60391 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.64□□□□□ -1.83
GRIN3BO60391 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
GRIN3BO60391 AC069528.2-201ENST00000624849 1991 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 AL355596.1-201ENST00000565399 3996 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU1-75P-201ENST00000347264 129 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU6-923P-201ENST00000364753 107 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 SNORD116-18-201ENST00000383961 92 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 Y_RNA.435-201ENST00000384095 112 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 MIR764-201ENST00000390811 85 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU6-1248P-201ENST00000391096 64 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU6-257P-201ENST00000410238 98 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNA5SP475-201ENST00000410568 110 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 AC009963.1-201ENST00000417265 157 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.63□□□□□ -1.83
GRIN3BO60391 AC112771.1-201ENST00000463581 102 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RPL36AP48-201ENST00000485521 314 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU6-155P-201ENST00000516347 100 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 RNU6-711P-201ENST00000517255 106 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GRIN3BO60391 AC112693.2-201ENST00000556538 232 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
GRIN3BO60391 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GRIN3BO60391 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GRIN3BO60391 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GRIN3BO60391 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.62□□□□□ -1.83
GRIN3BO60391 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.62□□□□□ -1.83
GRIN3BO60391 Y_RNA.415-201ENST00000384012 112 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 AC004866.1-201ENST00000411748 78 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 AC004386.2-201ENST00000441858 148 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.62□□□□□ -1.83
GRIN3BO60391 RNU4-57P-201ENST00000515980 135 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 RNU6-191P-201ENST00000516295 94 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 RNU2-12P-201ENST00000517216 168 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 AP005660.1-201ENST00000522972 293 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 DEFB131C-201ENST00000528817 165 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 RPL17P51-201ENST00000605218 238 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.62□□□□□ -1.83
GRIN3BO60391 AC068205.3-201ENST00000636385 468 ntBASIC3.62□□□□□ -1.83
GRIN3BO60391 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
GRIN3BO60391 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
GRIN3BO60391 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
GRIN3BO60391 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.62□□□□□ -1.83
GRIN3BO60391 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.62□□□□□ -1.83
GRIN3BO60391 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
GRIN3BO60391 RNU4-80P-201ENST00000363200 141 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 Y_RNA.218-201ENST00000364218 104 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 SNORA14A-201ENST00000364773 135 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 MIR767-201ENST00000390228 109 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 AC027124.2-201ENST00000428249 105 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 RNU6-426P-201ENST00000516464 97 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 SNORD59.2-201ENST00000516873 68 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.61□□□□□ -1.83
GRIN3BO60391 AC091895.1-201ENST00000624494 256 ntBASIC3.61□□□□□ -1.83
GRIN3BO60391 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.61□□□□□ -1.83
GRIN3BO60391 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GRIN3BO60391 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GRIN3BO60391 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
GRIN3BO60391 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
GRIN3BO60391 AC110774.1-201ENST00000623567 2018 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 RNU6-1255P-201ENST00000363434 112 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 Y_RNA.272-201ENST00000364696 102 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 CENPBD1P1-201ENST00000464061 469 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.6□□□□□ -1.83
GRIN3BO60391 SNORA72.7-201ENST00000516349 94 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 RNU6-1231P-201ENST00000517185 103 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 AC006380.1-201ENST00000603598 186 ntBASIC3.6□□□□□ -1.83
GRIN3BO60391 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.6□□□□□ -1.83
GRIN3BO60391 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
GRIN3BO60391 AC091564.4-201ENST00000533934 2194 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms