Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 Y_RNA.463-201ENST00000384271 102 ntBASIC1.92□□□□□ -2.1
SSX4O60224 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
SSX4O60224 Y_RNA.579-201ENST00000390939 94 ntBASIC1.92□□□□□ -2.1
SSX4O60224 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
SSX4O60224 AC114482.1-201ENST00000418010 247 ntBASIC1.92□□□□□ -2.1
SSX4O60224 AC074290.1-201ENST00000448883 135 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNU7-169P-201ENST00000459456 61 ntBASIC1.92□□□□□ -2.1
SSX4O60224 AC108210.2-201ENST00000503681 201 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNU2-34P-201ENST00000516534 121 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNU7-4P-201ENST00000516961 62 ntBASIC1.92□□□□□ -2.1
SSX4O60224 SNRPGP18-201ENST00000553000 214 ntBASIC1.92□□□□□ -2.1
SSX4O60224 DEFB122-202ENST00000569013 197 ntBASIC1.92□□□□□ -2.1
SSX4O60224 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.92□□□□□ -2.1
SSX4O60224 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.92□□□□□ -2.1
SSX4O60224 AL133255.1-201ENST00000606374 441 ntBASIC1.92□□□□□ -2.1
SSX4O60224 AC083806.3-201ENST00000614016 455 ntBASIC1.92□□□□□ -2.1
SSX4O60224 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSX4O60224 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SSX4O60224 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SSX4O60224 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
SSX4O60224 RNU6-1235P-201ENST00000384559 107 ntBASIC1.91□□□□□ -2.1
SSX4O60224 MIR221-201ENST00000385135 110 ntBASIC1.91□□□□□ -2.1
SSX4O60224 MIR548B-201ENST00000385247 97 ntBASIC1.91□□□□□ -2.1
SSX4O60224 Y_RNA.592-201ENST00000410274 109 ntBASIC1.91□□□□□ -2.1
SSX4O60224 MTND2P29-201ENST00000438595 412 ntBASIC1.91□□□□□ -2.1
SSX4O60224 AC099799.1-201ENST00000439809 192 ntBASIC1.91□□□□□ -2.1
SSX4O60224 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX4O60224 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX4O60224 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX4O60224 snoU13.23-201ENST00000458863 104 ntBASIC1.91□□□□□ -2.1
SSX4O60224 RNU6-498P-201ENST00000459468 107 ntBASIC1.91□□□□□ -2.1
SSX4O60224 RNU6-856P-201ENST00000516959 98 ntBASIC1.91□□□□□ -2.1
SSX4O60224 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
SSX4O60224 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.91□□□□□ -2.1
SSX4O60224 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
SSX4O60224 SDR42E1P4-201ENST00000620894 481 ntBASIC1.91□□□□□ -2.1
SSX4O60224 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
SSX4O60224 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX4O60224 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSX4O60224 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.91□□□□□ -2.1
SSX4O60224 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
SSX4O60224 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
SSX4O60224 RNU6-1115P-201ENST00000362490 106 ntBASIC1.9□□□□□ -2.11
SSX4O60224 Y_RNA.315-201ENST00000365117 102 ntBASIC1.9□□□□□ -2.11
SSX4O60224 Y_RNA.419-201ENST00000384041 102 ntBASIC1.9□□□□□ -2.11
SSX4O60224 RNU6-1145P-201ENST00000384246 107 ntBASIC1.9□□□□□ -2.11
SSX4O60224 RNU6-318P-201ENST00000384283 103 ntBASIC1.9□□□□□ -2.11
SSX4O60224 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
SSX4O60224 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SSX4O60224 RNA5SP501-201ENST00000410990 112 ntBASIC1.9□□□□□ -2.11
SSX4O60224 RNU6-57P-201ENST00000411348 103 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AC060773.1-201ENST00000421698 310 ntBASIC1.9□□□□□ -2.11
SSX4O60224 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX4O60224 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AC027575.1-201ENST00000481064 460 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AC144568.1-201ENST00000520139 137 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.9□□□□□ -2.11
SSX4O60224 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
SSX4O60224 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.9□□□□□ -2.11
SSX4O60224 snoZ196.1-201ENST00000625269 89 ntBASIC1.9□□□□□ -2.11
SSX4O60224 AC245060.5-201ENST00000610778 3293 ntBASIC1.9□□□□□ -2.11
SSX4O60224 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
SSX4O60224 U3.8-201ENST00000363675 217 ntBASIC1.89□□□□□ -2.11
SSX4O60224 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SSX4O60224 Y_RNA.595-201ENST00000410403 105 ntBASIC1.89□□□□□ -2.11
SSX4O60224 Y_RNA.605-201ENST00000410577 105 ntBASIC1.89□□□□□ -2.11
SSX4O60224 MTND4P28-201ENST00000426217 387 ntBASIC1.89□□□□□ -2.11
SSX4O60224 NDUFB4P10-201ENST00000452541 359 ntBASIC1.89□□□□□ -2.11
SSX4O60224 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
SSX4O60224 MIR2355-201ENST00000517199 87 ntBASIC1.89□□□□□ -2.11
SSX4O60224 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
SSX4O60224 AL357075.2-201ENST00000614906 189 ntBASIC1.89□□□□□ -2.11
SSX4O60224 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
SSX4O60224 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
SSX4O60224 RNU6-1301P-201ENST00000362724 104 ntBASIC1.88□□□□□ -2.11
SSX4O60224 Y_RNA.61-201ENST00000362835 102 ntBASIC1.88□□□□□ -2.11
SSX4O60224 Y_RNA.428-201ENST00000384078 102 ntBASIC1.88□□□□□ -2.11
SSX4O60224 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
SSX4O60224 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
SSX4O60224 MIR764-201ENST00000390811 85 ntBASIC1.88□□□□□ -2.11
SSX4O60224 AC096644.2-201ENST00000429278 159 ntBASIC1.88□□□□□ -2.11
SSX4O60224 AL353689.1-201ENST00000438895 199 ntBASIC1.88□□□□□ -2.11
SSX4O60224 ATP5J2P3-201ENST00000451550 258 ntBASIC1.88□□□□□ -2.11
SSX4O60224 RNU6-1041P-201ENST00000516254 102 ntBASIC1.88□□□□□ -2.11
SSX4O60224 RNVU1-2-201ENST00000516326 135 ntBASIC1.88□□□□□ -2.11
SSX4O60224 RNU6-107P-201ENST00000516643 102 ntBASIC1.88□□□□□ -2.11
SSX4O60224 RN7SKP49-201ENST00000516675 260 ntBASIC1.88□□□□□ -2.11
SSX4O60224 SNORD116.3-201ENST00000517176 78 ntBASIC1.88□□□□□ -2.11
SSX4O60224 SUMO2P18-201ENST00000518873 252 ntBASIC1.88□□□□□ -2.11
SSX4O60224 AC091144.1-201ENST00000519573 138 ntBASIC1.88□□□□□ -2.11
SSX4O60224 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
SSX4O60224 MIR4287-201ENST00000579398 78 ntBASIC1.88□□□□□ -2.11
SSX4O60224 AL050343.2-201ENST00000607338 280 ntBASIC1.88□□□□□ -2.11
SSX4O60224 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.88□□□□□ -2.11
SSX4O60224 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
SSX4O60224 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SSX4O60224 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
SSX4O60224 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSX4O60224 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms