Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 Y_RNA.64-201ENST00000362845 102 ntBASIC2.54□□□□□ -2
RRP9O43818 Y_RNA.105-201ENST00000363182 111 ntBASIC2.54□□□□□ -2
RRP9O43818 U3.8-201ENST00000363675 217 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU6-743P-201ENST00000364151 106 ntBASIC2.54□□□□□ -2
RRP9O43818 Y_RNA.230-201ENST00000364348 109 ntBASIC2.54□□□□□ -2
RRP9O43818 SNORA25B-201ENST00000365507 128 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU6-438P-201ENST00000365561 103 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU6-937P-201ENST00000384325 106 ntBASIC2.54□□□□□ -2
RRP9O43818 Y_RNA.512-201ENST00000384518 102 ntBASIC2.54□□□□□ -2
RRP9O43818 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.54□□□□□ -2
RRP9O43818 SNORD115-46-201ENST00000390982 71 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU6-121P-201ENST00000410525 99 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU2-48P-201ENST00000410694 191 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU5A-5P-201ENST00000411054 116 ntBASIC2.54□□□□□ -2
RRP9O43818 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.54□□□□□ -2
RRP9O43818 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
RRP9O43818 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
RRP9O43818 AC074290.1-201ENST00000448883 135 ntBASIC2.54□□□□□ -2
RRP9O43818 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.54□□□□□ -2
RRP9O43818 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
RRP9O43818 RNU6-667P-201ENST00000517186 102 ntBASIC2.54□□□□□ -2
RRP9O43818 AP003733.2-201ENST00000529409 171 ntBASIC2.54□□□□□ -2
RRP9O43818 AL161670.1-201ENST00000554348 137 ntBASIC2.54□□□□□ -2
RRP9O43818 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.54□□□□□ -2
RRP9O43818 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RRP9O43818 AC096644.4-201ENST00000563417 2912 ntBASIC2.53□□□□□ -2
RRP9O43818 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
RRP9O43818 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RRP9O43818 MIR410-201ENST00000362222 80 ntBASIC2.53□□□□□ -2
RRP9O43818 Y_RNA.26-201ENST00000362539 101 ntBASIC2.53□□□□□ -2
RRP9O43818 SNORA72.2-201ENST00000365028 127 ntBASIC2.53□□□□□ -2
RRP9O43818 RNU6-1310P-201ENST00000384153 107 ntBASIC2.53□□□□□ -2
RRP9O43818 RNU2-20P-201ENST00000410425 191 ntBASIC2.53□□□□□ -2
RRP9O43818 AL390729.2-201ENST00000416137 156 ntBASIC2.53□□□□□ -2
RRP9O43818 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
RRP9O43818 TOMM22P2-201ENST00000430735 237 ntBASIC2.53□□□□□ -2
RRP9O43818 HMGN2P18-201ENST00000450680 270 ntBASIC2.53□□□□□ -2
RRP9O43818 AC016925.1-201ENST00000458303 298 ntBASIC2.53□□□□□ -2
RRP9O43818 RN7SL863P-201ENST00000462370 296 ntBASIC2.53□□□□□ -2
RRP9O43818 RN7SL274P-201ENST00000492268 272 ntBASIC2.53□□□□□ -2
RRP9O43818 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.53□□□□□ -2
RRP9O43818 RNU1-40P-201ENST00000516816 164 ntBASIC2.53□□□□□ -2
RRP9O43818 RNU1-97P-201ENST00000516872 164 ntBASIC2.53□□□□□ -2
RRP9O43818 SNORA70.24-201ENST00000517233 118 ntBASIC2.53□□□□□ -2
RRP9O43818 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
RRP9O43818 MIR4423-201ENST00000580922 80 ntBASIC2.53□□□□□ -2
RRP9O43818 AL109918.3-201ENST00000603072 338 ntBASIC2.53□□□□□ -2
RRP9O43818 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
RRP9O43818 MIR8062-201ENST00000621515 85 ntBASIC2.53□□□□□ -2
RRP9O43818 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.53□□□□□ -2
RRP9O43818 MIR3674-201ENST00000636576 68 ntBASIC2.53□□□□□ -2
RRP9O43818 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RRP9O43818 Y_RNA.222-201ENST00000364264 102 ntBASIC2.52□□□□□ -2.01
RRP9O43818 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.52□□□□□ -2.01
RRP9O43818 Y_RNA.556-201ENST00000384677 113 ntBASIC2.52□□□□□ -2.01
RRP9O43818 Y_RNA.570-201ENST00000384750 101 ntBASIC2.52□□□□□ -2.01
RRP9O43818 SNORA48.5-201ENST00000391143 135 ntBASIC2.52□□□□□ -2.01
RRP9O43818 MIR4503-201ENST00000582187 83 ntBASIC2.52□□□□□ -2.01
RRP9O43818 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.52□□□□□ -2.01
RRP9O43818 AC011373.1-201ENST00000607270 237 ntBASIC2.52□□□□□ -2.01
RRP9O43818 U4.1-201ENST00000620349 87 ntBASIC2.52□□□□□ -2.01
RRP9O43818 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.52□□□□□ -2.01
RRP9O43818 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RRP9O43818 U6.104-201ENST00000637979 90 ntBASIC2.52□□□□□ -2.01
RRP9O43818 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.51□□□□□ -2.01
RRP9O43818 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
RRP9O43818 Y_RNA.452-201ENST00000384202 108 ntBASIC2.51□□□□□ -2.01
RRP9O43818 SUMO2P12-201ENST00000405924 140 ntBASIC2.51□□□□□ -2.01
RRP9O43818 SNORA11.1-201ENST00000408133 129 ntBASIC2.51□□□□□ -2.01
RRP9O43818 RNA5SP475-201ENST00000410568 110 ntBASIC2.51□□□□□ -2.01
RRP9O43818 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.51□□□□□ -2.01
RRP9O43818 RPL21P38-201ENST00000418090 167 ntBASIC2.51□□□□□ -2.01
RRP9O43818 RPL23AP83-201ENST00000434984 473 ntBASIC2.51□□□□□ -2.01
RRP9O43818 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.51□□□□□ -2.01
RRP9O43818 AL137159.1-201ENST00000452808 512 ntBASIC2.51□□□□□ -2.01
RRP9O43818 AC025033.1-201ENST00000463883 194 ntBASIC2.51□□□□□ -2.01
RRP9O43818 MIR3149-201ENST00000584629 83 ntBASIC2.51□□□□□ -2.01
RRP9O43818 MIR7112-201ENST00000616126 65 ntBASIC2.51□□□□□ -2.01
RRP9O43818 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.51□□□□□ -2.01
RRP9O43818 AC080100.1-201ENST00000624239 5356 ntBASIC2.51□□□□□ -2.01
RRP9O43818 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RRP9O43818 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.5□□□□□ -2.01
RRP9O43818 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.5□□□□□ -2.01
RRP9O43818 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
RRP9O43818 SNORD113-8-201ENST00000363497 74 ntBASIC2.5□□□□□ -2.01
RRP9O43818 RNU6-1175P-201ENST00000365200 107 ntBASIC2.5□□□□□ -2.01
RRP9O43818 Y_RNA.461-201ENST00000384263 103 ntBASIC2.5□□□□□ -2.01
RRP9O43818 RNU6-574P-201ENST00000384265 107 ntBASIC2.5□□□□□ -2.01
RRP9O43818 MIR548B-201ENST00000385247 97 ntBASIC2.5□□□□□ -2.01
RRP9O43818 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.5□□□□□ -2.01
RRP9O43818 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.5□□□□□ -2.01
RRP9O43818 AL021397.1-201ENST00000451806 248 ntBASIC2.5□□□□□ -2.01
RRP9O43818 BX510359.1-201ENST00000456973 237 ntBASIC2.5□□□□□ -2.01
RRP9O43818 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.5□□□□□ -2.01
RRP9O43818 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.5□□□□□ -2.01
RRP9O43818 RNU6-991P-201ENST00000516168 107 ntBASIC2.5□□□□□ -2.01
RRP9O43818 RNU7-110P-201ENST00000516891 62 ntBASIC2.5□□□□□ -2.01
RRP9O43818 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.5□□□□□ -2.01
RRP9O43818 AP002001.1-203ENST00000534002 267 ntBASIC2.5□□□□□ -2.01
RRP9O43818 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms