Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC091133.4-201ENST00000511142 308 ntBASIC0.86□□□□□ -2.27
RNF13O43567 SCARNA16.2-201ENST00000516520 172 ntBASIC0.86□□□□□ -2.27
RNF13O43567 AC016957.1-201ENST00000534895 309 ntBASIC0.86□□□□□ -2.27
RNF13O43567 AL359821.1-201ENST00000605519 182 ntBASIC0.86□□□□□ -2.27
RNF13O43567 FAM157A-202ENST00000615155 405 ntBASIC0.86□□□□□ -2.27
RNF13O43567 RNU6-1266P-201ENST00000362794 105 ntBASIC0.85□□□□□ -2.27
RNF13O43567 SNORD114-24-201ENST00000365029 72 ntBASIC0.85□□□□□ -2.27
RNF13O43567 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
RNF13O43567 RNU4-55P-201ENST00000410731 137 ntBASIC0.85□□□□□ -2.27
RNF13O43567 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.85□□□□□ -2.27
RNF13O43567 MTND2P9-201ENST00000422293 931 ntBASIC0.85□□□□□ -2.27
RNF13O43567 RNU6-956P-201ENST00000458868 103 ntBASIC0.85□□□□□ -2.27
RNF13O43567 RNU6-1332P-201ENST00000516666 104 ntBASIC0.85□□□□□ -2.27
RNF13O43567 Y_RNA.717-201ENST00000517106 92 ntBASIC0.85□□□□□ -2.27
RNF13O43567 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.85□□□□□ -2.27
RNF13O43567 AC104383.1-201ENST00000530297 370 ntBASIC0.85□□□□□ -2.27
RNF13O43567 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.85□□□□□ -2.27
RNF13O43567 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.85□□□□□ -2.27
RNF13O43567 AC008088.1-201ENST00000580993 280 ntBASIC0.85□□□□□ -2.27
RNF13O43567 AC073534.2-201ENST00000620377 381 ntBASIC0.85□□□□□ -2.27
RNF13O43567 AC106754.2-201ENST00000623006 233 ntBASIC0.85□□□□□ -2.27
RNF13O43567 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.84□□□□□ -2.27
RNF13O43567 SNORD50.1-201ENST00000362987 71 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNU6-137P-201ENST00000363680 108 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNU6-1322P-201ENST00000364309 107 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNU4-9P-201ENST00000364951 139 ntBASIC0.84□□□□□ -2.27
RNF13O43567 MIR514A2-201ENST00000385131 88 ntBASIC0.84□□□□□ -2.27
RNF13O43567 MIR514A3-201ENST00000385132 88 ntBASIC0.84□□□□□ -2.27
RNF13O43567 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
RNF13O43567 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.84□□□□□ -2.27
RNF13O43567 AC079354.2-201ENST00000453523 154 ntBASIC0.84□□□□□ -2.27
RNF13O43567 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.84□□□□□ -2.27
RNF13O43567 AC108729.3-201ENST00000513484 108 ntBASIC0.84□□□□□ -2.27
RNF13O43567 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNA5SP168-201ENST00000516642 112 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNU6-58P-201ENST00000517143 103 ntBASIC0.84□□□□□ -2.27
RNF13O43567 SNORA28-201ENST00000606769 126 ntBASIC0.84□□□□□ -2.27
RNF13O43567 RNU6-199P-201ENST00000362954 107 ntBASIC0.83□□□□□ -2.28
RNF13O43567 SNORD113-7-201ENST00000363762 77 ntBASIC0.83□□□□□ -2.28
RNF13O43567 RNU6-392P-201ENST00000364926 101 ntBASIC0.83□□□□□ -2.28
RNF13O43567 MIR200A-201ENST00000384875 90 ntBASIC0.83□□□□□ -2.28
RNF13O43567 CALM2P3-201ENST00000400429 449 ntBASIC0.83□□□□□ -2.28
RNF13O43567 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.83□□□□□ -2.28
RNF13O43567 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.83□□□□□ -2.28
RNF13O43567 TRMT112P2-201ENST00000512910 132 ntBASIC0.83□□□□□ -2.28
RNF13O43567 RNU6-237P-201ENST00000515985 71 ntBASIC0.83□□□□□ -2.28
RNF13O43567 AC090049.2-201ENST00000550377 109 ntBASIC0.83□□□□□ -2.28
RNF13O43567 AC026371.1-201ENST00000551867 419 ntBASIC0.83□□□□□ -2.28
RNF13O43567 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.83□□□□□ -2.28
RNF13O43567 AC121247.2-201ENST00000604776 136 ntBASIC0.83□□□□□ -2.28
RNF13O43567 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
RNF13O43567 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.83□□□□□ -2.28
RNF13O43567 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.83□□□□□ -2.28
RNF13O43567 Y_RNA.319-201ENST00000365138 92 ntBASIC0.82□□□□□ -2.28
RNF13O43567 SNORA69-201ENST00000383895 132 ntBASIC0.82□□□□□ -2.28
RNF13O43567 RNU6-128P-201ENST00000383976 107 ntBASIC0.82□□□□□ -2.28
RNF13O43567 Y_RNA.481-201ENST00000384373 102 ntBASIC0.82□□□□□ -2.28
RNF13O43567 SNORD41-201ENST00000386967 70 ntBASIC0.82□□□□□ -2.28
RNF13O43567 Y_RNA.582-201ENST00000391023 95 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.82□□□□□ -2.28
RNF13O43567 AL353572.1-201ENST00000442490 417 ntBASIC0.82□□□□□ -2.28
RNF13O43567 MTND3P16-201ENST00000452205 344 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.82□□□□□ -2.28
RNF13O43567 SNORA25.14-201ENST00000516481 132 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AL590705.4-201ENST00000532209 134 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.82□□□□□ -2.28
RNF13O43567 AK6P2-201ENST00000549020 471 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.82□□□□□ -2.28
RNF13O43567 FRG2DP-202ENST00000566967 323 ntBASIC0.82□□□□□ -2.28
RNF13O43567 MIR4498-201ENST00000577599 66 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.82□□□□□ -2.28
RNF13O43567 AC006435.5-201ENST00000624486 112 ntBASIC0.82□□□□□ -2.28
RNF13O43567 AC018630.2-201ENST00000534866 2403 ntBASIC0.81□□□□□ -2.28
RNF13O43567 AP000568.1-201ENST00000282964 442 ntBASIC0.81□□□□□ -2.28
RNF13O43567 SNORD87-201ENST00000364849 89 ntBASIC0.81□□□□□ -2.28
RNF13O43567 MIR32-201ENST00000384965 70 ntBASIC0.81□□□□□ -2.28
RNF13O43567 MIR153-2-201ENST00000385225 87 ntBASIC0.81□□□□□ -2.28
RNF13O43567 AL590002.1-201ENST00000406554 418 ntBASIC0.81□□□□□ -2.28
RNF13O43567 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.81□□□□□ -2.28
RNF13O43567 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
RNF13O43567 AC114482.1-201ENST00000418010 247 ntBASIC0.81□□□□□ -2.28
RNF13O43567 SNORD124-201ENST00000459577 104 ntBASIC0.81□□□□□ -2.28
RNF13O43567 HMGN1P7-201ENST00000491722 313 ntBASIC0.81□□□□□ -2.28
RNF13O43567 TRBVA-201ENST00000498804 316 ntBASIC0.81□□□□□ -2.28
RNF13O43567 PDCD5P2-201ENST00000507570 312 ntBASIC0.81□□□□□ -2.28
RNF13O43567 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.81□□□□□ -2.28
RNF13O43567 ACA64.5-201ENST00000516207 127 ntBASIC0.81□□□□□ -2.28
RNF13O43567 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.81□□□□□ -2.28
RNF13O43567 AC006504.8-201ENST00000621046 635 ntBASIC0.81□□□□□ -2.28
RNF13O43567 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
RNF13O43567 Y_RNA.124-201ENST00000363339 93 ntBASIC0.8□□□□□ -2.28
RNF13O43567 RNU5F-3P-201ENST00000363767 117 ntBASIC0.8□□□□□ -2.28
RNF13O43567 Y_RNA.338-201ENST00000365320 114 ntBASIC0.8□□□□□ -2.28
RNF13O43567 SNORA80D-201ENST00000384488 135 ntBASIC0.8□□□□□ -2.28
RNF13O43567 RNU6-648P-201ENST00000410190 107 ntBASIC0.8□□□□□ -2.28
RNF13O43567 STAG3L5P-204ENST00000443759 179 ntBASIC0.8□□□□□ -2.28
RNF13O43567 AC005840.1-201ENST00000498412 377 ntBASIC0.8□□□□□ -2.28
RNF13O43567 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.8□□□□□ -2.28
RNF13O43567 RNU6-322P-201ENST00000516010 103 ntBASIC0.8□□□□□ -2.28
RNF13O43567 CBX3P8-201ENST00000532412 525 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms