Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 Y_RNA.460-201ENST00000384255 102 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 Y_RNA.463-201ENST00000384271 102 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.11□□□□□ -2.07
ATP2A1O14983 EIF1P2-201ENST00000428233 350 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AL445305.1-201ENST00000432577 575 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AC105758.1-201ENST00000506038 399 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RNU6-1170P-201ENST00000515974 106 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RNU6-976P-201ENST00000516086 111 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RNU6-250P-201ENST00000516958 103 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RNU6-699P-201ENST00000517081 110 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 MIR2355-201ENST00000517199 87 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 RRN3P3-201ENST00000549207 578 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 SNORD11B-201ENST00000607707 90 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.11□□□□□ -2.07
ATP2A1O14983 AC005296.1-201ENST00000616145 209 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AL359314.1-201ENST00000616913 261 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AC090574.1-201ENST00000623186 233 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 AC008873.1-201ENST00000625051 138 ntBASIC2.11□□□□□ -2.07
ATP2A1O14983 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
ATP2A1O14983 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ATP2A1O14983 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATP2A1O14983 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATP2A1O14983 RNU6-545P-201ENST00000362681 104 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 Y_RNA.358-201ENST00000365491 99 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 RNU6-281P-201ENST00000384212 103 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 RNU6-793P-201ENST00000384233 104 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 Y_RNA.557-201ENST00000384680 107 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 MIR586-201ENST00000385035 97 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 SNORA69.1-201ENST00000390904 137 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 HMGN2P39-201ENST00000398005 273 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 RNU2-20P-201ENST00000410425 191 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.1□□□□□ -2.07
ATP2A1O14983 MRPS18CP6-201ENST00000423587 223 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.1□□□□□ -2.07
ATP2A1O14983 AC091144.1-201ENST00000519573 138 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC144568.1-201ENST00000520139 137 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.1□□□□□ -2.07
ATP2A1O14983 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.1□□□□□ -2.07
ATP2A1O14983 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.1□□□□□ -2.07
ATP2A1O14983 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 MIR4753-201ENST00000585119 83 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC125232.2-201ENST00000592457 143 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AC008749.1-201ENST00000597650 306 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.1□□□□□ -2.07
ATP2A1O14983 AC087588.2-201ENST00000617667 426 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 AL160413.1-201ENST00000622780 310 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 MTND4P29-201ENST00000503122 1372 ntBASIC2.1□□□□□ -2.07
ATP2A1O14983 Y_RNA.132-201ENST00000363421 102 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 Y_RNA.179-201ENST00000363844 90 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 Y_RNA.197-201ENST00000364004 102 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 Y_RNA.419-201ENST00000384041 102 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 Y_RNA.428-201ENST00000384078 102 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 SNORA67.2-201ENST00000384300 149 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 RNU6-160P-201ENST00000384591 107 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 RPS20P15-201ENST00000412792 311 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.09□□□□□ -2.07
ATP2A1O14983 AC007395.1-201ENST00000451333 677 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 AC114982.1-201ENST00000469402 321 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 HMGN2P9-201ENST00000476875 229 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 AC027575.1-201ENST00000481064 460 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.09□□□□□ -2.07
ATP2A1O14983 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
ATP2A1O14983 AC093023.1-201ENST00000547375 507 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.09□□□□□ -2.07
ATP2A1O14983 AC010999.1-201ENST00000611856 324 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.09□□□□□ -2.07
ATP2A1O14983 SDR42E1P4-201ENST00000620894 481 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 AC068205.3-201ENST00000636385 468 ntBASIC2.09□□□□□ -2.07
ATP2A1O14983 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
ATP2A1O14983 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
ATP2A1O14983 LINC02555-201ENST00000563933 1951 ntBASIC2.09□□□□□ -2.08
ATP2A1O14983 AC006026.1-201ENST00000444025 1803 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 Y_RNA.252-201ENST00000364556 101 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 Y_RNA.314-201ENST00000365114 102 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 MIR518A2-201ENST00000384966 87 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 Y_RNA.592-201ENST00000410274 109 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 RNA5SP504-201ENST00000410676 117 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 AC114482.1-201ENST00000418010 247 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 U8.22-201ENST00000459141 133 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 AC091179.3-201ENST00000474761 144 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 HMGN1P13-201ENST00000505795 138 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.08□□□□□ -2.08
ATP2A1O14983 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 SNORD116.3-201ENST00000517176 78 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.08□□□□□ -2.08
ATP2A1O14983 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.08□□□□□ -2.08
ATP2A1O14983 AL080274.1-201ENST00000605565 220 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 AC091925.1-201ENST00000623204 462 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.08□□□□□ -2.08
ATP2A1O14983 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms