Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.54□□□□□ -2
APAF1O14727 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.54□□□□□ -2
APAF1O14727 U2.1-201ENST00000618978 145 ntBASIC2.54□□□□□ -2
APAF1O14727 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.54□□□□□ -2
APAF1O14727 AC012640.5-201ENST00000623897 319 ntBASIC2.54□□□□□ -2
APAF1O14727 RNY3P4-201ENST00000384428 101 ntBASIC2.53□□□□□ -2
APAF1O14727 AL445305.1-201ENST00000432577 575 ntBASIC2.53□□□□□ -2
APAF1O14727 AC010095.1-201ENST00000443543 144 ntBASIC2.53□□□□□ -2
APAF1O14727 RNU7-57P-201ENST00000459540 60 ntBASIC2.53□□□□□ -2
APAF1O14727 Y_RNA.661-201ENST00000516003 99 ntBASIC2.53□□□□□ -2
APAF1O14727 snoZ196.1-201ENST00000625269 89 ntBASIC2.53□□□□□ -2
APAF1O14727 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.53□□□□□ -2
APAF1O14727 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
APAF1O14727 AC008555.8-201ENST00000623602 2168 ntBASIC2.53□□□□□ -2
APAF1O14727 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
APAF1O14727 Y_RNA.5-201ENST00000362334 102 ntBASIC2.52□□□□□ -2.01
APAF1O14727 RNU6-1301P-201ENST00000362724 104 ntBASIC2.52□□□□□ -2.01
APAF1O14727 RNA5SP493-201ENST00000364115 91 ntBASIC2.52□□□□□ -2.01
APAF1O14727 Y_RNA.419-201ENST00000384041 102 ntBASIC2.52□□□□□ -2.01
APAF1O14727 Y_RNA.526-201ENST00000384572 110 ntBASIC2.52□□□□□ -2.01
APAF1O14727 RNA5SP504-201ENST00000410676 117 ntBASIC2.52□□□□□ -2.01
APAF1O14727 RNU6-1001P-201ENST00000411265 100 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC008134.1-201ENST00000420943 193 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AL353689.1-201ENST00000438895 199 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC003989.2-201ENST00000440224 169 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AL137792.2-201ENST00000443484 235 ntBASIC2.52□□□□□ -2.01
APAF1O14727 PCNPP5-201ENST00000452246 481 ntBASIC2.52□□□□□ -2.01
APAF1O14727 RNU6-475P-201ENST00000516073 104 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.52□□□□□ -2.01
APAF1O14727 MIR3684-201ENST00000579779 74 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC005786.1-201ENST00000588553 154 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
APAF1O14727 MZT1P2-201ENST00000604387 248 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AL049779.4-201ENST00000604500 156 ntBASIC2.52□□□□□ -2.01
APAF1O14727 U1.36-201ENST00000620684 176 ntBASIC2.52□□□□□ -2.01
APAF1O14727 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.52□□□□□ -2.01
APAF1O14727 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
APAF1O14727 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.52□□□□□ -2.01
APAF1O14727 AC092881.1-201ENST00000638218 2733 ntBASIC2.52□□□□□ -2.01
APAF1O14727 AC006026.1-201ENST00000444025 1803 ntBASIC2.52□□□□□ -2.01
APAF1O14727 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
APAF1O14727 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
APAF1O14727 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 ZNF355P-201ENST00000427301 3216 ntBASIC2.51□□□□□ -2.01
APAF1O14727 MIR340-201ENST00000362125 95 ntBASIC2.51□□□□□ -2.01
APAF1O14727 RNU11-3P-201ENST00000391111 133 ntBASIC2.51□□□□□ -2.01
APAF1O14727 TOMM22P2-201ENST00000430735 237 ntBASIC2.51□□□□□ -2.01
APAF1O14727 UQCRBP2-201ENST00000447827 297 ntBASIC2.51□□□□□ -2.01
APAF1O14727 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.51□□□□□ -2.01
APAF1O14727 AC055731.1-201ENST00000474387 401 ntBASIC2.51□□□□□ -2.01
APAF1O14727 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.51□□□□□ -2.01
APAF1O14727 AC092447.9-201ENST00000603395 144 ntBASIC2.51□□□□□ -2.01
APAF1O14727 uc_338.22-201ENST00000622722 187 ntBASIC2.51□□□□□ -2.01
APAF1O14727 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.51□□□□□ -2.01
APAF1O14727 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.51□□□□□ -2.01
APAF1O14727 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
APAF1O14727 Y_RNA.27-201ENST00000362540 103 ntBASIC2.5□□□□□ -2.01
APAF1O14727 RNU6-727P-201ENST00000363592 107 ntBASIC2.5□□□□□ -2.01
APAF1O14727 RNU6-1264P-201ENST00000383891 107 ntBASIC2.5□□□□□ -2.01
APAF1O14727 Y_RNA.415-201ENST00000384012 112 ntBASIC2.5□□□□□ -2.01
APAF1O14727 RNU6-418P-201ENST00000384035 107 ntBASIC2.5□□□□□ -2.01
APAF1O14727 SNORA51.11-201ENST00000384442 131 ntBASIC2.5□□□□□ -2.01
APAF1O14727 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
APAF1O14727 MIR1283-2-201ENST00000408621 87 ntBASIC2.5□□□□□ -2.01
APAF1O14727 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
APAF1O14727 BX510359.4-201ENST00000423750 193 ntBASIC2.5□□□□□ -2.01
APAF1O14727 IPO7P1-201ENST00000442031 636 ntBASIC2.5□□□□□ -2.01
APAF1O14727 U8.22-201ENST00000459141 133 ntBASIC2.5□□□□□ -2.01
APAF1O14727 RNU6-1146P-201ENST00000516282 102 ntBASIC2.5□□□□□ -2.01
APAF1O14727 SNORA40.14-201ENST00000516543 86 ntBASIC2.5□□□□□ -2.01
APAF1O14727 SUMO2P18-201ENST00000518873 252 ntBASIC2.5□□□□□ -2.01
APAF1O14727 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.5□□□□□ -2.01
APAF1O14727 GNAI2P1-201ENST00000541815 315 ntBASIC2.5□□□□□ -2.01
APAF1O14727 AC110588.1-201ENST00000559699 137 ntBASIC2.5□□□□□ -2.01
APAF1O14727 MIR3169-201ENST00000578032 83 ntBASIC2.5□□□□□ -2.01
APAF1O14727 AC083806.3-201ENST00000614016 455 ntBASIC2.5□□□□□ -2.01
APAF1O14727 AC138305.3-201ENST00000624988 240 ntBASIC2.5□□□□□ -2.01
APAF1O14727 AL606534.2-204ENST00000635008 178 ntBASIC2.5□□□□□ -2.01
APAF1O14727 MIR4272-201ENST00000635924 64 ntBASIC2.5□□□□□ -2.01
APAF1O14727 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.49□□□□□ -2.01
APAF1O14727 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
APAF1O14727 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
APAF1O14727 AL159152.1-201ENST00000635019 2587 ntBASIC2.49□□□□□ -2.01
APAF1O14727 Y_RNA.128-201ENST00000363391 112 ntBASIC2.49□□□□□ -2.01
APAF1O14727 SNORA6-201ENST00000384033 151 ntBASIC2.49□□□□□ -2.01
APAF1O14727 RNU6-318P-201ENST00000384283 103 ntBASIC2.49□□□□□ -2.01
APAF1O14727 SNORA11.2-201ENST00000408318 127 ntBASIC2.49□□□□□ -2.01
APAF1O14727 RNU7-169P-201ENST00000459456 61 ntBASIC2.49□□□□□ -2.01
APAF1O14727 RNU6-221P-201ENST00000459541 99 ntBASIC2.49□□□□□ -2.01
APAF1O14727 AL590240.4-201ENST00000616908 390 ntBASIC2.49□□□□□ -2.01
APAF1O14727 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
APAF1O14727 SNORD114-6-201ENST00000364393 72 ntBASIC2.48□□□□□ -2.01
APAF1O14727 Y_RNA.445-201ENST00000384168 102 ntBASIC2.48□□□□□ -2.01
APAF1O14727 MIR548B-201ENST00000385247 97 ntBASIC2.48□□□□□ -2.01
APAF1O14727 SNORD78.2-201ENST00000391076 69 ntBASIC2.48□□□□□ -2.01
APAF1O14727 MIR1261-201ENST00000408659 82 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms