Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.56□□□□□ -2.16
CUX2O14529 USP9YP28-201ENST00000435142 589 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AC004386.2-201ENST00000441858 148 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MTCO1P44-201ENST00000441935 243 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.56□□□□□ -2.16
CUX2O14529 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.56□□□□□ -2.16
CUX2O14529 AC016925.1-201ENST00000458303 298 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MTCO1P29-201ENST00000496868 288 ntBASIC1.56□□□□□ -2.16
CUX2O14529 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.56□□□□□ -2.16
CUX2O14529 AC067942.3-201ENST00000512025 362 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNA5SP285-201ENST00000516619 119 ntBASIC1.56□□□□□ -2.16
CUX2O14529 SNORA31.17-201ENST00000516953 127 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MTND1P35-201ENST00000526739 508 ntBASIC1.56□□□□□ -2.16
CUX2O14529 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.56□□□□□ -2.16
CUX2O14529 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CUX2O14529 FAM71BP1-201ENST00000604431 523 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AC103810.9-201ENST00000606688 112 ntBASIC1.56□□□□□ -2.16
CUX2O14529 TCL6_2.1-201ENST00000615162 119 ntBASIC1.56□□□□□ -2.16
CUX2O14529 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CUX2O14529 RNU1-76P-201ENST00000362903 159 ntBASIC1.55□□□□□ -2.16
CUX2O14529 RNU6-1286P-201ENST00000383871 107 ntBASIC1.55□□□□□ -2.16
CUX2O14529 RNU6-790P-201ENST00000384479 105 ntBASIC1.55□□□□□ -2.16
CUX2O14529 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
CUX2O14529 Z83846.1-201ENST00000446798 265 ntBASIC1.55□□□□□ -2.16
CUX2O14529 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.55□□□□□ -2.16
CUX2O14529 RRN3P3-201ENST00000549207 578 ntBASIC1.55□□□□□ -2.16
CUX2O14529 AC133485.1-201ENST00000567176 124 ntBASIC1.55□□□□□ -2.16
CUX2O14529 AC138907.6-201ENST00000568401 126 ntBASIC1.55□□□□□ -2.16
CUX2O14529 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
CUX2O14529 AC010525.2-201ENST00000590920 195 ntBASIC1.55□□□□□ -2.16
CUX2O14529 AL359697.1-201ENST00000624879 587 ntBASIC1.55□□□□□ -2.16
CUX2O14529 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CUX2O14529 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.54□□□□□ -2.16
CUX2O14529 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU5B-2P-201ENST00000363036 113 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU6-112P-201ENST00000363599 104 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU6-414P-201ENST00000363705 104 ntBASIC1.54□□□□□ -2.16
CUX2O14529 Y_RNA.231-201ENST00000364358 102 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU6-968P-201ENST00000384076 107 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU2-16P-201ENST00000410712 136 ntBASIC1.54□□□□□ -2.16
CUX2O14529 MTCO1P21-201ENST00000416634 589 ntBASIC1.54□□□□□ -2.16
CUX2O14529 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.54□□□□□ -2.16
CUX2O14529 RPL23AP75-201ENST00000491601 451 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RNU6-1041P-201ENST00000516254 102 ntBASIC1.54□□□□□ -2.16
CUX2O14529 Y_RNA.704-201ENST00000516851 102 ntBASIC1.54□□□□□ -2.16
CUX2O14529 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CUX2O14529 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.54□□□□□ -2.16
CUX2O14529 AC009229.3-201ENST00000608056 282 ntBASIC1.54□□□□□ -2.16
CUX2O14529 RMST_3.1-201ENST00000611651 109 ntBASIC1.54□□□□□ -2.16
CUX2O14529 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.54□□□□□ -2.16
CUX2O14529 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.53□□□□□ -2.16
CUX2O14529 MIR340-201ENST00000362125 95 ntBASIC1.53□□□□□ -2.16
CUX2O14529 SNORD113-7-201ENST00000363762 77 ntBASIC1.53□□□□□ -2.16
CUX2O14529 MIR1283-1-201ENST00000408494 87 ntBASIC1.53□□□□□ -2.16
CUX2O14529 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.53□□□□□ -2.16
CUX2O14529 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.53□□□□□ -2.16
CUX2O14529 RPS29P28-201ENST00000446439 141 ntBASIC1.53□□□□□ -2.16
CUX2O14529 PCMTD1P1-201ENST00000455560 355 ntBASIC1.53□□□□□ -2.16
CUX2O14529 snoU13.9-201ENST00000458927 103 ntBASIC1.53□□□□□ -2.16
CUX2O14529 AC091435.1-201ENST00000505442 584 ntBASIC1.53□□□□□ -2.16
CUX2O14529 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.53□□□□□ -2.16
CUX2O14529 ZNF519P2-201ENST00000557032 169 ntBASIC1.53□□□□□ -2.16
CUX2O14529 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CUX2O14529 AC005562.2-201ENST00000618264 111 ntBASIC1.53□□□□□ -2.16
CUX2O14529 RNU6-1019P-201ENST00000364424 107 ntBASIC1.52□□□□□ -2.17
CUX2O14529 Y_RNA.559-201ENST00000384686 107 ntBASIC1.52□□□□□ -2.17
CUX2O14529 RNU6-332P-201ENST00000391193 108 ntBASIC1.52□□□□□ -2.17
CUX2O14529 AC019235.1-201ENST00000503847 207 ntBASIC1.52□□□□□ -2.17
CUX2O14529 AC146944.4-201ENST00000602697 718 ntBASIC1.52□□□□□ -2.17
CUX2O14529 MIR3976-201ENST00000606807 139 ntBASIC1.52□□□□□ -2.17
CUX2O14529 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.52□□□□□ -2.17
CUX2O14529 AC048344.4-201ENST00000619744 527 ntBASIC1.52□□□□□ -2.17
CUX2O14529 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.52□□□□□ -2.17
CUX2O14529 AC068137.3-201ENST00000639191 341 ntBASIC1.52□□□□□ -2.17
CUX2O14529 AC010615.1-201ENST00000594254 1764 ntBASIC1.52□□□□□ -2.17
CUX2O14529 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
CUX2O14529 Y_RNA.372-201ENST00000365599 102 ntBASIC1.51□□□□□ -2.17
CUX2O14529 RNU6-128P-201ENST00000383976 107 ntBASIC1.51□□□□□ -2.17
CUX2O14529 RNU6-784P-201ENST00000384330 106 ntBASIC1.51□□□□□ -2.17
CUX2O14529 MIR520A-201ENST00000384862 85 ntBASIC1.51□□□□□ -2.17
CUX2O14529 MIR1265-201ENST00000408444 86 ntBASIC1.51□□□□□ -2.17
CUX2O14529 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.51□□□□□ -2.17
CUX2O14529 OR2AQ1P-201ENST00000451972 200 ntBASIC1.51□□□□□ -2.17
CUX2O14529 AC010531.2-201ENST00000465012 153 ntBASIC1.51□□□□□ -2.17
CUX2O14529 RPL31P58-201ENST00000469001 379 ntBASIC1.51□□□□□ -2.17
CUX2O14529 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.51□□□□□ -2.17
CUX2O14529 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.51□□□□□ -2.17
CUX2O14529 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
CUX2O14529 RNU6-506P-201ENST00000516553 94 ntBASIC1.51□□□□□ -2.17
CUX2O14529 RNU6-1198P-201ENST00000516904 67 ntBASIC1.51□□□□□ -2.17
CUX2O14529 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.51□□□□□ -2.17
CUX2O14529 AC026470.2-201ENST00000561492 181 ntBASIC1.51□□□□□ -2.17
CUX2O14529 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
CUX2O14529 CTHRC1P1-201ENST00000605383 469 ntBASIC1.51□□□□□ -2.17
CUX2O14529 Y_RNA.151-201ENST00000363566 112 ntBASIC1.5□□□□□ -2.17
CUX2O14529 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
CUX2O14529 Y_RNA.549-201ENST00000384657 102 ntBASIC1.5□□□□□ -2.17
CUX2O14529 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
CUX2O14529 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.5□□□□□ -2.17
CUX2O14529 MTCO3P8-201ENST00000453691 755 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms