Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RNU6-727P-201ENST00000363592 107 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 Y_RNA.212-201ENST00000364177 102 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 SNORD87-201ENST00000364849 89 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNU6-245P-201ENST00000384020 107 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNU6-541P-201ENST00000384709 110 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 MIR153-2-201ENST00000385225 87 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AL161935.2-201ENST00000414627 60 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RPL30P16-201ENST00000419341 429 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC016907.1-201ENST00000419483 435 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.29□□□□□ -2.2
CLDN5O00501 AC008134.1-201ENST00000420943 193 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC027119.1-201ENST00000440877 241 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC103851.1-201ENST00000506833 274 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 RNA5SP454-201ENST00000517231 127 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC025647.1-201ENST00000517879 253 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.29□□□□□ -2.2
CLDN5O00501 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.29□□□□□ -2.2
CLDN5O00501 AC015688.6-201ENST00000577737 104 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AP003465.2-201ENST00000602571 373 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 PRR13P7-201ENST00000605538 430 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC124303.1-201ENST00000605703 360 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC012557.2-201ENST00000605919 418 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC015540.1-201ENST00000615828 501 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 MTND5P35-201ENST00000557537 1720 ntBASIC1.29□□□□□ -2.2
CLDN5O00501 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.28□□□□□ -2.2
CLDN5O00501 SNORD33-201ENST00000362761 85 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 Y_RNA.135-201ENST00000363439 95 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 RNU6-873P-201ENST00000363833 107 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 SNORD115-8-201ENST00000363856 82 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 SNORD115-32-201ENST00000364079 82 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 RNU6-392P-201ENST00000364926 101 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 SNORD115-38-201ENST00000365037 82 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 Y_RNA.436-201ENST00000384097 102 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CLDN5O00501 MTATP6P26-201ENST00000445926 662 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC099513.1-201ENST00000490423 301 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AL163195.1-201ENST00000496941 348 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.28□□□□□ -2.2
CLDN5O00501 RNU6-1198P-201ENST00000516904 67 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC080078.3-201ENST00000605407 463 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 MIR6078-201ENST00000611069 100 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC091895.1-201ENST00000624494 256 ntBASIC1.28□□□□□ -2.2
CLDN5O00501 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN5O00501 RNU6-534P-201ENST00000364877 106 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RNU6-1240P-201ENST00000365155 104 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 Y_RNA.402-201ENST00000383972 102 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RPL30P13-201ENST00000418873 348 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN5O00501 MTND3P21-201ENST00000433774 331 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 MTATP6P13-201ENST00000438531 667 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RNU6-221P-201ENST00000459541 99 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RPL30P10-201ENST00000488148 337 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 RNU1-142P-201ENST00000516682 145 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AC024995.1-201ENST00000523014 93 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.27□□□□□ -2.21
CLDN5O00501 AC027288.2-201ENST00000553028 243 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 UBL5P4-201ENST00000562584 236 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.27□□□□□ -2.21
CLDN5O00501 MIR3942-201ENST00000585264 109 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AC009033.1-201ENST00000624279 431 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 AC090617.10-201ENST00000624308 134 ntBASIC1.27□□□□□ -2.21
CLDN5O00501 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.27□□□□□ -2.21
CLDN5O00501 MTND4P12-201ENST00000498999 1377 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLDN5O00501 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 Y_RNA.415-201ENST00000384012 112 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 RNU6-1065P-201ENST00000384513 106 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 MIR513A1-201ENST00000385138 129 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CLDN5O00501 RPL21P1-201ENST00000399532 476 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.26□□□□□ -2.21
CLDN5O00501 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.26□□□□□ -2.21
CLDN5O00501 AL442163.3-201ENST00000554110 156 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 AL929325.1-201ENST00000603096 117 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 AC040896.1-201ENST00000613819 479 ntBASIC1.26□□□□□ -2.21
CLDN5O00501 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.26□□□□□ -2.21
CLDN5O00501 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
CLDN5O00501 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.25□□□□□ -2.21
CLDN5O00501 RNA5SP259-201ENST00000365541 109 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 SNORD116-11-201ENST00000383882 92 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 MIR181A1-201ENST00000385026 110 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 RNU6-1186P-201ENST00000410429 97 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 RNU6-373P-201ENST00000411247 98 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 AC010154.1-201ENST00000425857 269 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 AC005002.2-201ENST00000438228 269 ntBASIC1.25□□□□□ -2.21
CLDN5O00501 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.25□□□□□ -2.21
CLDN5O00501 HMGN1P7-201ENST00000491722 313 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 327.4 ms