Protein–RNA interactions for Protein: A7XYQ1

SOBP, Sine oculis-binding protein homolog, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOBPA7XYQ1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 MIR3651-201ENST00000630427 90 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 AP003122.5-201ENST00000527668 3766 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SOBPA7XYQ1 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
SOBPA7XYQ1 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AL356292.1-201ENST00000283110 373 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.40-201ENST00000362645 93 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.203-201ENST00000364106 102 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 MIR493-201ENST00000385254 89 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AL031121.1-201ENST00000406553 254 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC008134.1-201ENST00000420943 193 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC073261.1-201ENST00000429409 121 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 HMGN2P21-201ENST00000447764 270 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 RPL39P39-201ENST00000455840 151 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 OR9P1P-201ENST00000496431 281 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 RNU1-95P-201ENST00000516357 160 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 RNU1-128P-201ENST00000516704 160 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 RN7SKP57-201ENST00000517248 293 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 RPL23AP91-201ENST00000569211 455 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC087499.8-201ENST00000578406 226 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC244505.7-201ENST00000599675 272 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 MIR7975-201ENST00000619350 68 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 5S_rRNA.13-201ENST00000622298 123 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 AC002064.3-201ENST00000623448 346 ntBASIC4.04□□□□□ -1.76
SOBPA7XYQ1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SOBPA7XYQ1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RNU6-529P-201ENST00000363383 104 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.213-201ENST00000364178 111 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RNU6-1276P-201ENST00000365372 104 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 Y_RNA.486-201ENST00000384398 107 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 U8.11-201ENST00000384699 133 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RNU6-788P-201ENST00000390967 104 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 U8.18-201ENST00000459285 133 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 HMGN2P9-201ENST00000476875 229 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RPL32P34-201ENST00000486380 400 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RPS26P48-201ENST00000491713 339 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 AC145146.1-201ENST00000496370 254 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 AC025554.1-201ENST00000505641 188 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 RNU7-149P-201ENST00000516739 59 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 SCARNA15-202ENST00000516881 127 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 Pinc.1-201ENST00000616452 154 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 U7.8-201ENST00000619968 63 ntBASIC4.03□□□□□ -1.76
SOBPA7XYQ1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SOBPA7XYQ1 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 Y_RNA.796-201ENST00000364268 102 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 RNU6-1305P-201ENST00000364353 104 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 Y_RNA.799-201ENST00000364992 102 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 RNU6-117P-201ENST00000365415 107 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 RNU6-787P-201ENST00000384032 107 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC011406.1-201ENST00000512440 370 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 RNU6-504P-201ENST00000516568 104 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 SCARNA14-201ENST00000516903 136 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC141557.1-201ENST00000540982 400 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC019288.1-201ENST00000557918 224 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AL929325.1-201ENST00000603096 117 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 U3.45-201ENST00000607547 219 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 uc_338.32-201ENST00000615087 172 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SOBPA7XYQ1 AC103988.1-201ENST00000566382 2177 ntBASIC4.02□□□□□ -1.77
SOBPA7XYQ1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 SNORA1-201ENST00000384107 130 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 SNORA5A-201ENST00000384111 134 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 AL139095.1-201ENST00000404326 391 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 AL117342.1-201ENST00000404861 406 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 AC245291.1-201ENST00000419501 328 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 SNORD65B-201ENST00000459126 73 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 MIR3129-201ENST00000581095 76 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 MIR486-1-201ENST00000612171 68 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 AL049781.1-201ENST00000623195 3585 ntBASIC4.01□□□□□ -1.77
SOBPA7XYQ1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SOBPA7XYQ1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
SOBPA7XYQ1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SOBPA7XYQ1 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SOBPA7XYQ1 RNY1P1-201ENST00000364372 112 ntBASIC4□□□□□ -1.77
SOBPA7XYQ1 SNORA51.4-201ENST00000364993 124 ntBASIC4□□□□□ -1.77
SOBPA7XYQ1 RNU6-242P-201ENST00000384359 107 ntBASIC4□□□□□ -1.77
SOBPA7XYQ1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms