Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 USP9YP23-201ENST00000455085 407 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 TOMM22P6-201ENST00000465035 409 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.88□□□□□ -2.11
SHISA7A6NL88 RNU6-699P-201ENST00000517081 110 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.88□□□□□ -2.11
SHISA7A6NL88 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC026470.2-201ENST00000561492 181 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 MIR4719-201ENST00000585233 84 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AL138825.1-201ENST00000618587 192 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC022140.2-201ENST00000623500 188 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 AC134503.1-201ENST00000633048 54 ntBASIC1.88□□□□□ -2.11
SHISA7A6NL88 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHISA7A6NL88 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SHISA7A6NL88 RNA5SP276-201ENST00000362580 94 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 RNU6-694P-201ENST00000364071 147 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 RNU6-280P-201ENST00000364145 104 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 Y_RNA.364-201ENST00000365532 101 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 Y_RNA.463-201ENST00000384271 102 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 RNU6-378P-201ENST00000384324 107 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR559-201ENST00000385188 96 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR29C-201ENST00000385231 88 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 Y_RNA.639-201ENST00000458981 102 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 Y_RNA.631-201ENST00000459607 101 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.87□□□□□ -2.11
SHISA7A6NL88 AL442663.2-201ENST00000554385 511 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 AC010928.2-201ENST00000588017 287 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 BX248123.2-201ENST00000606318 124 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 AL355802.3-201ENST00000607571 545 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR1244-1-201ENST00000612829 85 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR1244-3-201ENST00000635744 85 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR1244-2-201ENST00000636449 85 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 MIR1244-4-202ENST00000636813 85 ntBASIC1.87□□□□□ -2.11
SHISA7A6NL88 RNU6-1115P-201ENST00000362490 106 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 Y_RNA.39-201ENST00000362620 98 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 SNORD115-3-201ENST00000363100 82 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 Y_RNA.112-201ENST00000363250 102 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 Y_RNA.252-201ENST00000364556 101 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 SNORD42.2-201ENST00000365570 69 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 Y_RNA.395-201ENST00000383945 109 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 MIR628-201ENST00000385229 95 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 SNORA69.1-201ENST00000390904 137 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AL357139.1-201ENST00000407792 426 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC114482.1-201ENST00000418010 247 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC005534.2-201ENST00000431047 433 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 RNA5SP490-201ENST00000517141 136 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 MIR2355-201ENST00000517199 87 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 RNU6-988P-201ENST00000519081 107 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 AC090517.1-201ENST00000569307 266 ntBASIC1.86□□□□□ -2.11
SHISA7A6NL88 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SHISA7A6NL88 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHISA7A6NL88 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
SHISA7A6NL88 SNORA63-201ENST00000363450 132 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 SNORD115-8-201ENST00000363856 82 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 RNU6-743P-201ENST00000364151 106 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 SNORD115-38-201ENST00000365037 82 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 RNU6-234P-201ENST00000365229 104 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 SNORD14D-201ENST00000384390 87 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 SNORA51.11-201ENST00000384442 131 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 MIR1262-201ENST00000408276 93 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 MIR548P-201ENST00000408336 84 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.85□□□□□ -2.11
SHISA7A6NL88 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 AL035666.1-201ENST00000446195 348 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 RPL23AP7-203ENST00000449021 469 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 AC105758.1-201ENST00000506038 399 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 AC093259.1-201ENST00000509755 300 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 RNU6-120P-201ENST00000516077 103 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.85□□□□□ -2.11
SHISA7A6NL88 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.85□□□□□ -2.11
SHISA7A6NL88 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SHISA7A6NL88 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SHISA7A6NL88 ZNF204P-201ENST00000416749 2397 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 MTND5P16-201ENST00000460269 1703 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 Y_RNA.99-201ENST00000363138 105 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 Y_RNA.106-201ENST00000363189 100 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 RNU1-115P-201ENST00000365329 160 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC117470.1-201ENST00000381974 330 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 MIR518A2-201ENST00000384966 87 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.84□□□□□ -2.11
SHISA7A6NL88 AL021397.1-201ENST00000451806 248 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC007215.1-201ENST00000464893 276 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.84□□□□□ -2.11
SHISA7A6NL88 RNU6-1114P-201ENST00000516022 107 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 MIR449C-201ENST00000516047 92 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 RNU6-58P-201ENST00000517143 103 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC090617.3-201ENST00000573670 475 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC006157.1-201ENST00000611750 366 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC083806.3-201ENST00000614016 455 ntBASIC1.84□□□□□ -2.11
SHISA7A6NL88 AC005562.2-201ENST00000618264 111 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms