Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 RAB11AP2-201ENST00000545905 639 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AK6P2-201ENST00000549020 471 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 MIR5094-201ENST00000578766 85 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AC126177.8-201ENST00000618339 1015 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 AC068205.3-201ENST00000636385 468 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 ZNF72P-201ENST00000425869 1908 ntBASIC1.7□□□□□ -2.14
NKX6-3A6NJ46 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 RNU6-862P-201ENST00000362804 105 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 RNU6-137P-201ENST00000363680 108 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 MIR625-201ENST00000385047 85 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 RNU1-139P-201ENST00000391307 165 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AL023284.1-201ENST00000403956 276 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.605-201ENST00000410577 105 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AC114482.1-201ENST00000418010 247 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 EIF1P2-201ENST00000428233 350 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AC074290.1-201ENST00000448883 135 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 RPL23AP3-201ENST00000453844 468 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 RNU6-699P-201ENST00000517081 110 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 MIR4299-201ENST00000577899 72 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.783-201ENST00000613546 102 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AC022513.1-201ENST00000624512 117 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AL359697.1-201ENST00000624879 587 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 ZNF355P-201ENST00000427301 3216 ntBASIC1.69□□□□□ -2.14
NKX6-3A6NJ46 AC009487.4-201ENST00000624969 3585 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.577-201ENST00000384794 101 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 MIR559-201ENST00000385188 96 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 SNORA69.1-201ENST00000390904 137 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC236972.2-201ENST00000434979 310 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AL357134.1-201ENST00000445848 426 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 ATP5J2P3-201ENST00000451550 258 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 ELOCP24-201ENST00000456370 334 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 RNU1-131P-201ENST00000458943 161 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC067942.3-201ENST00000512025 362 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.661-201ENST00000516003 99 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.683-201ENST00000516508 93 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC091144.1-201ENST00000519573 138 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AL357075.2-201ENST00000614906 189 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC087588.2-201ENST00000617667 426 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AL008636.1-201ENST00000625038 1018 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 AC073544.1-201ENST00000600110 1595 ntBASIC1.68□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.419-201ENST00000384041 102 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RNU6-926P-201ENST00000384075 107 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 SNORA67.3-201ENST00000384366 140 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RNU6-1235P-201ENST00000384559 107 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 MT-TD-201ENST00000387419 68 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 HMGN2P34-201ENST00000437647 269 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 UQCRBP2-201ENST00000447827 297 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RPL23AP7-203ENST00000449021 469 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RNU6-498P-201ENST00000459468 107 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 UBL5P3-201ENST00000475112 231 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC011406.1-201ENST00000512440 370 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 RNU6-856P-201ENST00000516959 98 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC027419.1-201ENST00000522976 328 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC104984.5-201ENST00000586878 94 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC080078.3-201ENST00000605407 463 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 MIR6715A-201ENST00000615929 79 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC008873.1-201ENST00000625051 138 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 snoZ196.1-201ENST00000625269 89 ntBASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.146-201ENST00000363549 102 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 RNU5F-3P-201ENST00000363767 117 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 RNA5SP160-201ENST00000364866 120 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 RNU6-1040P-201ENST00000383974 107 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 RNU6-318P-201ENST00000384283 103 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 MIR329-1-201ENST00000385028 80 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.579-201ENST00000390939 94 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 AC019129.1-201ENST00000403786 261 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 SUMO2P12-201ENST00000405924 140 ntBASIC1.66□□□□□ -2.14
NKX6-3A6NJ46 Y_RNA.595-201ENST00000410403 105 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms