Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SNORA80D-201ENST00000384488 135 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 MIR532-201ENST00000385025 91 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 RNU6-1186P-201ENST00000410429 97 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AL606490.4-201ENST00000423117 127 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 MTCO2P19-201ENST00000427513 598 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 NDUFA5P4-201ENST00000436704 385 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 BET1P1-201ENST00000482276 359 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 RPL23AP75-201ENST00000491601 451 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 MIR3908-201ENST00000579798 126 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AC040904.1-201ENST00000590850 223 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AC092747.3-201ENST00000603769 301 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 MIR6857-201ENST00000613267 93 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 MIR6734-201ENST00000621166 68 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 AC027514.1-201ENST00000588561 1603 ntBASIC0.62□□□□□ -2.31
RBFOX3A6NFN3 HSBP1P2-201ENST00000299671 229 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 U3.8-201ENST00000363675 217 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 RNY3P9-201ENST00000384727 106 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 MIR1185-2-201ENST00000408687 86 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC073464.1-201ENST00000429823 534 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 MTCO1P29-201ENST00000496868 288 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 SNORA40.12-201ENST00000516329 111 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC090142.3-201ENST00000519012 385 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC136628.3-201ENST00000521868 290 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 MIR4698-201ENST00000577795 80 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 FAM106DP-201ENST00000586416 501 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AL357312.1-201ENST00000603879 298 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 SNORA28-201ENST00000606769 126 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AL357078.3-201ENST00000607528 618 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 MIR6866-201ENST00000638146 69 ntBASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.61□□□□□ -2.31
RBFOX3A6NFN3 AC008163.1-202ENST00000636004 2889 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 RNU6-969P-201ENST00000383900 105 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 MIR487A-201ENST00000385009 80 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AL451046.2-201ENST00000403074 277 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AL663109.1-201ENST00000411498 844 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 RPS26P48-201ENST00000491713 339 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC011604.1-201ENST00000545978 196 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC100830.2-201ENST00000581636 240 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC080078.2-201ENST00000603766 501 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AC017083.3-201ENST00000609955 700 ntBASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
RBFOX3A6NFN3 AP000568.1-201ENST00000282964 442 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 MIR96-201ENST00000362288 78 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 RNU6-1266P-201ENST00000362794 105 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.269-201ENST00000364685 89 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 RNU6-42P-201ENST00000384165 107 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 MIR521-1-201ENST00000384902 87 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 MTCO3P18-201ENST00000440206 761 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 RPS29P1-201ENST00000465274 159 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 Y_RNA.654-201ENST00000497848 106 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AC092436.3-201ENST00000511788 257 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 RNU6-322P-201ENST00000516010 103 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 SNORA19.2-201ENST00000516013 114 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AL118558.2-201ENST00000556294 238 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 MIR4778-201ENST00000577635 80 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AC091931.1-201ENST00000623488 728 ntBASIC0.59□□□□□ -2.31
RBFOX3A6NFN3 AC018630.2-201ENST00000534866 2403 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 SNORD115-32-201ENST00000364079 82 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-214P-201ENST00000384130 107 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-424P-201ENST00000384367 105 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-348P-201ENST00000384386 107 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-933P-201ENST00000384424 107 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 MIR520E-201ENST00000384867 87 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AL353193.1-201ENST00000421444 268 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 MTCO2P16-201ENST00000436962 677 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 STAG3L5P-204ENST00000443759 179 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RPL39P39-201ENST00000455840 151 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-917P-201ENST00000516294 104 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 AC007834.2-201ENST00000536310 343 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 APOOP3-201ENST00000536787 586 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 FRG2DP-202ENST00000566967 323 ntBASIC0.58□□□□□ -2.32
RBFOX3A6NFN3 MIR4528-201ENST00000577763 90 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 322.3 ms