Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RNU6-463P-201ENST00000384340 107 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RNU6-102P-201ENST00000384485 104 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MIR215-201ENST00000384858 110 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MIR1262-201ENST00000408276 93 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MIR1185-2-201ENST00000408687 86 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RN7SKP123-201ENST00000410732 291 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RPL23AP36-201ENST00000413895 458 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 AC005042.3-201ENST00000453230 174 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RPL23AP3-201ENST00000453844 468 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 RNU2-34P-201ENST00000516534 121 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 AC068657.1-201ENST00000520807 306 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 AL161670.1-201ENST00000554348 137 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 AC090115.4-201ENST00000609970 188 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
MBD3L4A6NDZ8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 MIR26A1-201ENST00000362205 77 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-859P-201ENST00000362728 107 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.446-201ENST00000384178 104 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-160P-201ENST00000384591 107 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 MIR196B-201ENST00000384852 84 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 MIR1302-6-201ENST00000408466 90 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 MIR1261-201ENST00000408659 82 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 RNU2-52P-201ENST00000410680 190 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 RNA5SP508-201ENST00000411327 119 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AC096920.1-201ENST00000423991 241 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AL357134.1-201ENST00000445848 426 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AC245102.2-201ENST00000448956 180 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-221P-201ENST00000459541 99 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 SEPT14P8-201ENST00000508026 178 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AL031274.2-201ENST00000599419 203 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AC022441.3-201ENST00000605737 136 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 U6.104-201ENST00000637979 90 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 AC092593.1-201ENST00000515413 1815 ntBASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
MBD3L4A6NDZ8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 RNA5SP432-201ENST00000362480 116 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 RNU4-90P-201ENST00000362773 141 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 RNU1-112P-201ENST00000364401 164 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.396-201ENST00000383949 103 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.581-201ENST00000391017 97 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 RPL21P3-201ENST00000395517 478 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 MTCO1P44-201ENST00000441935 243 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 TRBVB-201ENST00000477100 408 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 RN7SL283P-201ENST00000489055 303 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 MIR4503-201ENST00000582187 83 ntBASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.45□□□□□ -2.02
MBD3L4A6NDZ8 AL161431.1-201ENST00000618966 4205 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 snoU2_19.2-201ENST00000363024 80 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-324P-201ENST00000363957 106 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.286-201ENST00000364813 102 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 RNU2-54P-201ENST00000410299 190 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AC008134.1-201ENST00000420943 193 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 HSPE1P25-201ENST00000455484 251 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 RN7SL75P-201ENST00000461926 281 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 HMGB3P17-201ENST00000504195 649 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 RNU6-496P-201ENST00000516145 99 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 RNU2-12P-201ENST00000517216 168 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AC007536.1-201ENST00000533382 349 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AC091544.4-201ENST00000555268 342 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 MIR3149-201ENST00000584629 83 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 ZNF861P-201ENST00000588126 639 ntBASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.44□□□□□ -2.02
MBD3L4A6NDZ8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 MIR340-201ENST00000362125 95 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 MIR148B-201ENST00000362252 99 ntBASIC2.43□□□□□ -2.02
MBD3L4A6NDZ8 Y_RNA.84-201ENST00000363011 104 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms