Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 MTCO1P44-201ENST00000441935 243 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC007215.1-201ENST00000464893 276 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 RPL31P58-201ENST00000469001 379 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC046134.1-201ENST00000514454 666 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 SNORA25.14-201ENST00000516481 132 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 SNORA20.3-201ENST00000516880 132 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC005730.3-201ENST00000583067 366 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 TPTEP1-208ENST00000636884 213 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 AC099654.14-201ENST00000638599 341 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 ZNF299P-201ENST00000406845 1804 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AL159152.1-201ENST00000635019 2587 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RNU6-874P-201ENST00000362390 105 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.132-201ENST00000363421 102 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RNU6-873P-201ENST00000363833 107 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.319-201ENST00000365138 92 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RNU6-541P-201ENST00000384709 110 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 MIR518E-201ENST00000385252 88 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 SNORA40.19-201ENST00000390846 128 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AL033519.2-201ENST00000403958 392 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP504-201ENST00000410676 117 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AP000870.1-201ENST00000472927 406 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RPL36AP21-201ENST00000490372 323 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC116353.2-201ENST00000505332 712 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 PRDX4P1-201ENST00000507189 574 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC097473.1-201ENST00000508142 408 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 SCARNA16.2-201ENST00000516520 172 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AL590705.4-201ENST00000532209 134 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AL355073.2-201ENST00000612106 557 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC083806.3-201ENST00000614016 455 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 AC022306.2-201ENST00000617563 647 ntBASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.33□□□□□ -2.2
NKX2-6A6NCS4 BX322639.1-202ENST00000423987 2213 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.106-201ENST00000363189 100 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNU6-596P-201ENST00000365395 98 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNU6-17P-201ENST00000384245 107 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 SNORA67.2-201ENST00000384300 149 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MIR153-2-201ENST00000385225 87 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP465-201ENST00000391195 109 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 SNORA75.4-201ENST00000391278 119 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MIR934-201ENST00000401241 83 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MIR1276-201ENST00000408707 83 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RN7SKP51-201ENST00000410781 304 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AC098614.3-201ENST00000438957 440 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AC009237.7-201ENST00000447357 229 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AC008834.1-201ENST00000511612 175 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 RNU7-175P-201ENST00000515915 61 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.708-201ENST00000516950 96 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MIR5094-201ENST00000578766 85 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MIR4753-201ENST00000585119 83 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 SNRPGP20-201ENST00000604477 205 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 MTND4P12-201ENST00000498999 1377 ntBASIC1.32□□□□□ -2.2
NKX2-6A6NCS4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNU6-862P-201ENST00000362804 105 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.415-201ENST00000384012 112 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 Y_RNA.482-201ENST00000384377 111 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNU6-370P-201ENST00000411008 104 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 MTND3P23-201ENST00000431980 347 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AC099677.2-201ENST00000436385 175 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AC007395.1-201ENST00000451333 677 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 U8.22-201ENST00000459141 133 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNU7-87P-201ENST00000459343 62 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 HMGN2P9-201ENST00000476875 229 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 HMGN1P7-201ENST00000491722 313 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 RNU6-507P-201ENST00000516045 100 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AK6P2-201ENST00000549020 471 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 AC026470.2-201ENST00000561492 181 ntBASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.31□□□□□ -2.2
NKX2-6A6NCS4 MIR5695-201ENST00000579717 85 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms