Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AL512605.2-201ENST00000592972 256 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.09□□□□□ -1.91
CCDC66A2RUB6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC66A2RUB6 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC66A2RUB6 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC66A2RUB6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 RNU1-35P-201ENST00000362782 153 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.76-201ENST00000362931 109 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 RNA5SP374-201ENST00000362939 125 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 RNU6-1305P-201ENST00000364353 104 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 MTND5P15-201ENST00000434246 349 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 RPS29P26-201ENST00000477483 171 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 MIR449C-201ENST00000516047 92 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 AC090115.4-201ENST00000609970 188 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC66A2RUB6 Z82209.1-201ENST00000422141 2135 ntBASIC3.08□□□□□ -1.92
CCDC66A2RUB6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 RNU4-80P-201ENST00000363200 141 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.274-201ENST00000364714 101 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.297-201ENST00000364950 91 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 RNU6-234P-201ENST00000365229 104 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 SNORA48.5-201ENST00000391143 135 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 MIR300-201ENST00000401138 83 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 RNU7-14P-201ENST00000459331 62 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 HMGN2P9-201ENST00000476875 229 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 SRIP1-201ENST00000489235 288 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 MIR3145-201ENST00000580727 82 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 MIR5739-201ENST00000619803 80 ntBASIC3.07□□□□□ -1.92
CCDC66A2RUB6 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC66A2RUB6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.82-201ENST00000363000 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.92-201ENST00000363043 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.122-201ENST00000363331 96 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.235-201ENST00000364412 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.306-201ENST00000365015 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.312-201ENST00000365089 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.322-201ENST00000365151 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 SNORA9.2-201ENST00000365361 133 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 MIR627-201ENST00000384979 97 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 MIR548B-201ENST00000385247 97 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 U3.40-201ENST00000408706 208 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.590-201ENST00000410140 107 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 RNA5SP181-201ENST00000410246 98 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 RNU2-61P-201ENST00000411069 191 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.650-201ENST00000459002 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 AC090515.1-201ENST00000465295 476 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 AC023141.11-201ENST00000508864 202 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 RNU6-191P-201ENST00000516295 94 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.679-201ENST00000516416 91 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 SNORA31.11-201ENST00000516528 139 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 RNU6-182P-201ENST00000516970 105 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.777-201ENST00000516982 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 SNORA81.3-201ENST00000517283 198 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 MIR4325-201ENST00000583049 90 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.771-201ENST00000598668 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 DEFB117-201ENST00000602356 141 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.789-201ENST00000622480 102 ntBASIC3.06□□□□□ -1.92
CCDC66A2RUB6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC66A2RUB6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CCDC66A2RUB6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RNU6-545P-201ENST00000362681 104 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.83-201ENST00000363005 113 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.117-201ENST00000363294 101 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RNU6-324P-201ENST00000363957 106 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.199-201ENST00000364014 102 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.329-201ENST00000365209 107 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RNU6-1289P-201ENST00000384431 106 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 MIR181A2-201ENST00000384863 110 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 MIR1283-1-201ENST00000408494 87 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RNU6-436P-201ENST00000516171 114 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RNA5SP402-201ENST00000517148 110 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 AC109329.2-201ENST00000519658 482 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 MIR4282-201ENST00000583613 67 ntBASIC3.05□□□□□ -1.92
CCDC66A2RUB6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC66A2RUB6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC66A2RUB6 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC66A2RUB6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC66A2RUB6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CCDC66A2RUB6 Y_RNA.29-201ENST00000362570 113 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms