Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MIR1253-201ENST00000408273 105 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 RNA5SP201-201ENST00000410316 124 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
HFM1A2PYH4 RNU6-1315P-201ENST00000517187 99 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.22□□□□□ -2.6
HFM1A2PYH4 SNORA28-201ENST00000606769 126 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
HFM1A2PYH4 RNU1-76P-201ENST00000362903 159 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 RNA5SP205-201ENST00000364653 136 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 SNORD83B-201ENST00000386745 93 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.23□□□□□ -2.61
HFM1A2PYH4 RPL21P38-201ENST00000418090 167 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC092427.1-201ENST00000439177 601 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC007547.1-201ENST00000462177 490 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 CR383656.4-201ENST00000546909 122 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 MIR4676-201ENST00000583078 72 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC012433.1-201ENST00000588916 398 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC020891.4-201ENST00000605745 93 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 MIR6514-201ENST00000622549 70 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 RNU6-78P-201ENST00000362897 107 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 RNU6-1097P-201ENST00000363586 107 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 RNU6-343P-201ENST00000364709 104 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 SNORD32A-201ENST00000364805 84 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 MIR520C-201ENST00000385005 87 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-1.23□□□□□ -2.61
HFM1A2PYH4 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-1.23□□□□□ -2.61
HFM1A2PYH4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-1.23□□□□□ -2.61
HFM1A2PYH4 SNORD38B-202ENST00000625943 69 ntBASIC-1.23□□□□□ -2.61
HFM1A2PYH4 SNORA72.1-201ENST00000363485 129 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 RNU6-613P-201ENST00000410412 108 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-1.24□□□□□ -2.61
HFM1A2PYH4 SCARNA18-201ENST00000459004 134 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AC007215.1-201ENST00000464893 276 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 MTND1P36-201ENST00000522384 936 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.24□□□□□ -2.61
HFM1A2PYH4 MIR3152-201ENST00000579801 74 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AC008608.1-201ENST00000603910 127 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AL139286.2-201ENST00000606838 396 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AC008250.2-201ENST00000615261 205 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 MIR1322-201ENST00000638013 71 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 AC006927.4-201ENST00000639187 543 ntBASIC-1.24□□□□□ -2.61
HFM1A2PYH4 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 Y_RNA.336-201ENST00000365307 109 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 RNU6-701P-201ENST00000384059 107 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 MIR217-201ENST00000384817 110 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 RNU2-3P-201ENST00000410144 191 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 AL627311.1-201ENST00000431514 115 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 SNORA18.7-201ENST00000516910 131 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 AC087883.1-201ENST00000551882 391 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 MIR4771-2-201ENST00000577758 74 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 MIR4771-1-201ENST00000582617 74 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 MIR3925-201ENST00000584674 77 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 RPL17P51-201ENST00000605218 238 ntBASIC-1.25□□□□□ -2.61
HFM1A2PYH4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.25□□□□□ -2.61
HFM1A2PYH4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-1.25□□□□□ -2.61
HFM1A2PYH4 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 RNU6-811P-201ENST00000384069 107 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 RNU6-378P-201ENST00000384324 107 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 MTND3P20-201ENST00000407663 186 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 MIR1185-2-201ENST00000408687 86 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC-1.26□□□□□ -2.61
HFM1A2PYH4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.26□□□□□ -2.61
HFM1A2PYH4 HSFY7P-201ENST00000432672 318 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 HSFY8P-201ENST00000437934 318 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 RPS24P1-201ENST00000438550 371 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 RPS29P27-201ENST00000463711 170 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 AL133153.1-201ENST00000557756 303 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 MIR3923-201ENST00000579521 83 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 Z99289.3-201ENST00000605586 594 ntBASIC-1.26□□□□□ -2.61
HFM1A2PYH4 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 MIR1305-201ENST00000408300 86 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 MLLT10P1-201ENST00000418346 262 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AL953862.1-201ENST00000423016 168 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 USP9YP28-201ENST00000435142 589 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 EEF1E1P1-201ENST00000446998 430 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AC006026.2-201ENST00000457376 180 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AC091885.1-201ENST00000506658 268 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 SNORA27.4-201ENST00000516650 95 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AC026616.1-201ENST00000523157 525 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 MIR4752-201ENST00000579672 72 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AC133794.1-201ENST00000602731 914 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AC006380.1-201ENST00000603598 186 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 AL357080.1-201ENST00000617394 239 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 FRG1KP-201ENST00000623592 341 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 SCARNA4-201ENST00000629045 128 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.27□□□□□ -2.61
HFM1A2PYH4 RNU6-580P-201ENST00000365159 107 ntBASIC-1.28□□□□□ -2.61
HFM1A2PYH4 MIR300-201ENST00000401138 83 ntBASIC-1.28□□□□□ -2.61
HFM1A2PYH4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.28□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms