Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 Y_RNA.654-201ENST00000497848 106 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.15□□□□□ -2.23
CLRN2A0PK11 CYP3A137P-201ENST00000562436 69 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 BX284668.6-201ENST00000606899 438 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 AC009509.4-201ENST00000619202 509 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 AC137590.2-201ENST00000619709 240 ntBASIC1.15□□□□□ -2.23
CLRN2A0PK11 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLRN2A0PK11 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLRN2A0PK11 Y_RNA.287-201ENST00000364853 94 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 SNORA25-201ENST00000384384 134 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 Y_RNA.553-201ENST00000384670 102 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 AC010154.1-201ENST00000425857 269 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.14□□□□□ -2.23
CLRN2A0PK11 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.14□□□□□ -2.23
CLRN2A0PK11 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.14□□□□□ -2.23
CLRN2A0PK11 RNU6-1132P-201ENST00000459214 107 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 MTCO1P29-201ENST00000496868 288 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 AC010424.1-201ENST00000506336 297 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.14□□□□□ -2.23
CLRN2A0PK11 AL929325.1-201ENST00000603096 117 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 MIR8076-201ENST00000611401 83 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 SCARNA4-201ENST00000629045 128 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 AC068647.2-201ENST00000637380 353 ntBASIC1.14□□□□□ -2.23
CLRN2A0PK11 RNU4-20P-201ENST00000365601 151 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 RNU6-790P-201ENST00000384479 105 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 MIR586-201ENST00000385035 97 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 CDK8P2-201ENST00000415020 547 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 MTCO2P16-201ENST00000436962 677 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 MTND3P16-201ENST00000452205 344 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 RNU1-142P-201ENST00000516682 145 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.13□□□□□ -2.23
CLRN2A0PK11 MIR4742-201ENST00000581069 85 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 AC090582.1-201ENST00000636321 199 ntBASIC1.13□□□□□ -2.23
CLRN2A0PK11 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CLRN2A0PK11 RNU6-1322P-201ENST00000364309 107 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 SNORD116-8-201ENST00000384365 95 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 RNY1P4-201ENST00000384595 115 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 Y_RNA.582-201ENST00000391023 95 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 EIF4E2P1-201ENST00000393781 255 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 MIR450B-201ENST00000401182 78 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AL590002.1-201ENST00000406554 418 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AL356776.1-201ENST00000406574 447 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.12□□□□□ -2.23
CLRN2A0PK11 RNU6-261P-201ENST00000459506 102 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 RNU6-1208P-201ENST00000459588 107 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AC007215.1-201ENST00000464893 276 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 RPL23AP75-201ENST00000491601 451 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AC104383.1-201ENST00000530297 370 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.12□□□□□ -2.23
CLRN2A0PK11 AC026371.1-201ENST00000551867 419 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 HSPE1P19-201ENST00000603327 295 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AL022345.2-201ENST00000606307 135 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 snoZ196.1-201ENST00000625269 89 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 AC018630.2-201ENST00000534866 2403 ntBASIC1.12□□□□□ -2.23
CLRN2A0PK11 RNU1-133P-201ENST00000364867 167 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 SNORA22-201ENST00000383907 134 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 SNORA22C-201ENST00000384614 134 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 MIR216A-201ENST00000385063 110 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CLRN2A0PK11 RNU6-1186P-201ENST00000410429 97 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.11□□□□□ -2.23
CLRN2A0PK11 AL353572.1-201ENST00000442490 417 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC083798.1-201ENST00000472671 131 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC083904.1-201ENST00000487828 231 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.11□□□□□ -2.23
CLRN2A0PK11 CYCSP23-201ENST00000519781 313 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC021506.2-201ENST00000612354 169 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC073534.2-201ENST00000620377 381 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 AC097520.1-201ENST00000624435 385 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 MIR6863-201ENST00000636112 90 ntBASIC1.11□□□□□ -2.23
CLRN2A0PK11 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CLRN2A0PK11 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CLRN2A0PK11 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 RNU6-1240P-201ENST00000365155 104 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 RNU6-1042P-201ENST00000384204 107 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AC008134.1-201ENST00000420943 193 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 MTND1P26-201ENST00000440488 538 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.1□□□□□ -2.23
CLRN2A0PK11 AC091885.1-201ENST00000506658 268 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 SNORD116-28-201ENST00000516123 91 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.1□□□□□ -2.23
CLRN2A0PK11 AL020996.3-201ENST00000606617 222 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AP001330.5-201ENST00000607176 411 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AC017083.3-201ENST00000609955 700 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.1□□□□□ -2.23
CLRN2A0PK11 AC012676.2-201ENST00000619258 186 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 AL158209.2-201ENST00000619266 216 ntBASIC1.1□□□□□ -2.23
CLRN2A0PK11 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.1□□□□□ -2.23
CLRN2A0PK11 MIR3974-201ENST00000637126 96 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms