Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNU6-323P-201ENST00000521915 107 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AC112187.2-201ENST00000604345 283 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AC068792.1-201ENST00000621354 417 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 AL445984.1-201ENST00000637834 659 ntBASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.37□□□□□ -2.47
TCRBV3S1A0A5B6 ZNF204P-201ENST00000416749 2397 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA9.1-201ENST00000362412 131 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.164-201ENST00000363709 102 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-715P-201ENST00000365204 103 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-116P-201ENST00000384042 109 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MIR598-201ENST00000384868 97 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MIR520C-201ENST00000385005 87 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MIR610-201ENST00000385139 96 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MTND3P20-201ENST00000407663 186 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MIR548H2-201ENST00000408874 88 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AL031274.1-201ENST00000450334 232 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MTCO2P6-201ENST00000463134 685 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AC007215.1-201ENST00000464893 276 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 MIR8076-201ENST00000611401 83 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AC010999.1-201ENST00000611856 324 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 AC139792.3-201ENST00000623525 224 ntBASIC-0.38□□□□□ -2.47
TCRBV3S1A0A5B6 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.4-201ENST00000362333 112 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA1B-201ENST00000362535 133 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 Y_RNA.168-201ENST00000363740 102 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 U8.7-201ENST00000364940 136 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 SNORD115-7-201ENST00000365306 82 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 SNORD116.1-201ENST00000365628 92 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-641P-201ENST00000384006 107 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-929P-201ENST00000384429 107 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 MIR593-201ENST00000384856 100 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-127P-201ENST00000390897 107 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNA5SP482-201ENST00000391269 118 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 MIR891A-201ENST00000401237 79 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-613P-201ENST00000410412 108 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU2-59P-201ENST00000410482 191 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-387P-201ENST00000411331 105 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RPS24P1-201ENST00000438550 371 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU2-46P-201ENST00000517038 113 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-430P-201ENST00000517078 107 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 SNORA74.3-201ENST00000517108 154 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 RNU6-58P-201ENST00000517143 103 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 MTATP6P15-201ENST00000527233 835 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 AC104383.1-201ENST00000530297 370 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 AC025449.1-201ENST00000603896 529 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 MIR6755-201ENST00000619993 66 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 AP000943.4-201ENST00000622912 357 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.39□□□□□ -2.47
TCRBV3S1A0A5B6 MIR193B-201ENST00000384907 83 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 MIR1185-2-201ENST00000408687 86 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 Z98949.2-201ENST00000440996 144 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 snoU13.21-201ENST00000459368 105 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 AC010587.1-201ENST00000505809 469 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 AC010493.1-201ENST00000513479 292 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 MIR4764-201ENST00000580680 88 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 MIR4438-201ENST00000585271 93 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 AC091925.1-201ENST00000623204 462 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 MIR1295B-201ENST00000636144 60 ntBASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.4□□□□□ -2.47
TCRBV3S1A0A5B6 MIR330-201ENST00000362196 94 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 Y_RNA.97-201ENST00000363094 102 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNA5SP48-201ENST00000363969 126 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNY1P14-201ENST00000384426 108 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 ZNF885P-201ENST00000420174 1098 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 AC137499.1-201ENST00000427602 88 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 MTCO2P29-201ENST00000465212 189 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNU6-977P-201ENST00000516411 103 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 RNU2-56P-201ENST00000516826 190 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 SNORA25.17-201ENST00000517184 124 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 AK6P2-201ENST00000549020 471 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 MIR4804-201ENST00000581683 73 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 AC091178.2-201ENST00000584401 117 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 AL121992.2-201ENST00000606262 256 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 MIR98-201ENST00000606724 119 ntBASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.41□□□□□ -2.48
TCRBV3S1A0A5B6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 RNU6-179P-201ENST00000363350 107 ntBASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 RNA5SP325-201ENST00000363756 130 ntBASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 MIR643-201ENST00000385267 97 ntBASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 SNORD100-201ENST00000408573 76 ntBASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.42□□□□□ -2.48
TCRBV3S1A0A5B6 PDCL2P1-201ENST00000419302 352 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms