Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MIR454-201ENST00000390180 115 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AL365184.2-201ENST00000431139 435 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC079781.2-201ENST00000446424 169 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC010469.2-201ENST00000496412 480 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-612P-201ENST00000516909 102 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 RNA5SP454-201ENST00000517231 127 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AC036111.3-201ENST00000526389 112 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AP003327.1-201ENST00000529684 127 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 MIR4431-201ENST00000579990 94 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 MIR4300-201ENST00000581016 96 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 MIR4514-201ENST00000581410 57 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 7SK.7-201ENST00000603504 247 ntBASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.02□□□□□ -2.41
TRAV4A0A0B4J268 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MTND4P4-201ENST00000439033 1366 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RNA5SP62-201ENST00000363457 110 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RNU4-45P-201ENST00000365469 141 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MIR562-201ENST00000384894 95 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MIR1185-1-201ENST00000408598 86 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AC084290.1-201ENST00000434995 374 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 USP9YP29-201ENST00000445112 563 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MTND2P31-201ENST00000512602 616 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AC074133.1-201ENST00000515696 183 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RNU2-56P-201ENST00000516826 190 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AC022878.1-201ENST00000530684 149 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 BNIP3P39-201ENST00000601077 554 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AP000811.1-201ENST00000603803 651 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 LARP7P1-201ENST00000605576 316 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 RNU6-85P-201ENST00000605989 107 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV4A0A0B4J268 MIR1-1-201ENST00000362147 71 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 RNY1-201ENST00000364228 113 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-83P-201ENST00000384568 112 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 MIR1185-2-201ENST00000408687 86 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 AC104850.1-201ENST00000435940 476 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 SNRPGP12-201ENST00000449481 213 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 MTCO2P18-201ENST00000457151 658 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 CYCTP-201ENST00000504253 315 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 Vault.3-201ENST00000516676 95 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-430P-201ENST00000517078 107 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 MTCO3P23-201ENST00000561363 289 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 SNORD11B-201ENST00000607707 90 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 AC027807.2-201ENST00000616099 408 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 MIR6718-201ENST00000616153 80 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 SCARNA4-201ENST00000629045 128 ntBASIC-0.04□□□□□ -2.42
TRAV4A0A0B4J268 SNORD44.1-201ENST00000363202 61 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 SNORA25.3-201ENST00000363205 127 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR526A1-201ENST00000384897 85 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR32-201ENST00000384965 70 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 RNA5SP482-201ENST00000391269 118 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 USP9YP12-201ENST00000450481 570 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-58P-201ENST00000517143 103 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC022523.2-201ENST00000561045 150 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 FRG2DP-202ENST00000566967 323 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AGGF1P4-201ENST00000568249 801 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR4667-201ENST00000578933 66 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 RN7SL793P-201ENST00000583259 296 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR4438-201ENST00000585271 93 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 uc_338.34-201ENST00000617467 174 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC015726.2-201ENST00000620112 122 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR4315-1-201ENST00000636800 73 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC099654.13-201ENST00000639774 207 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 MIR4315-2-201ENST00000640925 73 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 AC005592.1-201ENST00000566527 1640 ntBASIC-0.05□□□□□ -2.42
TRAV4A0A0B4J268 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 MTND4P9-201ENST00000507819 1346 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 SNORD113.3-201ENST00000364630 78 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 AL355143.1-201ENST00000407101 841 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 SCARNA18-201ENST00000459004 134 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.06□□□□□ -2.42
TRAV4A0A0B4J268 AC092989.1-201ENST00000481235 277 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms