Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Gm36967-201ENSMUST00000193814 266 ntBASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Gm43767-201ENSMUST00000198933 381 ntBASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Lmcd1Q8VEE1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Gm22175-201ENSMUST00000175007 78 ntBASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Gm43474-201ENSMUST00000196415 774 ntBASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Lmcd1Q8VEE1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Gm27437-201ENSMUST00000183429 107 ntBASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Lmcd1Q8VEE1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Gm27430-201ENSMUST00000184585 107 ntBASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Gm44333-201ENSMUST00000197168 107 ntBASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Lmcd1Q8VEE1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lmcd1Q8VEE1 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms