Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BEST2Q8NFU1 GPAT2P1-201ENST00000444924 1672 ntBASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AL023284.2-201ENST00000405850 579 ntBASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AC005332.7-201ENST00000614046 2005 ntBASIC20.35■□□□□ 0.85
BEST2Q8NFU1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST2Q8NFU1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 MCCD1P1-208ENST00000445732 328 ntBASIC20.34■□□□□ 0.85
BEST2Q8NFU1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
BEST2Q8NFU1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 COX11P1-201ENST00000489116 835 ntBASIC20.33■□□□□ 0.85
BEST2Q8NFU1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST2Q8NFU1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 AC116562.4-201ENST00000641316 2276 ntBASIC20.33■□□□□ 0.84
BEST2Q8NFU1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST2Q8NFU1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
BEST2Q8NFU1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms