Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhb7Q8CDY9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Mir7071-201ENSMUST00000184847 69 ntBASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhb7Q8CDY9 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pcdhb7Q8CDY9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms