Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim35Q8C006 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim35Q8C006 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.84■□□□□ 0.29
Trim35Q8C006 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Trim35Q8C006 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Trim35Q8C006 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim35Q8C006 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.83■□□□□ 0.28
Trim35Q8C006 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim35Q8C006 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trim35Q8C006 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim35Q8C006 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Gm24241-201ENSMUST00000157787 145 ntBASIC16.82■□□□□ 0.28
Trim35Q8C006 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Mir8112-201ENSMUST00000184382 131 ntBASIC16.82■□□□□ 0.28
Trim35Q8C006 Gm7889-201ENSMUST00000185591 958 ntBASIC16.82■□□□□ 0.28
Trim35Q8C006 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Gm44421-201ENSMUST00000205064 1221 ntBASIC16.82■□□□□ 0.28
Trim35Q8C006 Reg2-201ENSMUST00000023906 698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Krtap13-201ENSMUST00000053149 882 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim35Q8C006 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim35Q8C006 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trim35Q8C006 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.81■□□□□ 0.28
Trim35Q8C006 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Gm16285-201ENSMUST00000162999 347 ntBASIC16.81■□□□□ 0.28
Trim35Q8C006 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.81■□□□□ 0.28
Trim35Q8C006 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC16.81■□□□□ 0.28
Trim35Q8C006 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.81■□□□□ 0.28
Trim35Q8C006 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC16.81■□□□□ 0.28
Trim35Q8C006 Gm44559-201ENSMUST00000207177 1012 ntBASIC16.81■□□□□ 0.28
Trim35Q8C006 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trim35Q8C006 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim35Q8C006 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.8■□□□□ 0.28
Trim35Q8C006 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms