Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.11■□□□□ 0.33
Trim6Q8BGE7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim6Q8BGE7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim6Q8BGE7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Odf3b-204ENSMUST00000227834 930 ntBASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim6Q8BGE7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Trim6Q8BGE7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim6Q8BGE7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim6Q8BGE7 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms