Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdh19Q80TF3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdh19Q80TF3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Gm7506-201ENSMUST00000207758 815 ntBASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdh19Q80TF3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Gm25406-201ENSMUST00000157599 105 ntBASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Gm6296-201ENSMUST00000222599 943 ntBASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Pcdh19Q80TF3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh19Q80TF3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh19Q80TF3 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdh19Q80TF3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms