Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CtifQ6PEE2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.21■□□□□ 0.35
CtifQ6PEE2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.21■□□□□ 0.35
CtifQ6PEE2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.21■□□□□ 0.35
CtifQ6PEE2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CtifQ6PEE2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.21■□□□□ 0.34
CtifQ6PEE2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CtifQ6PEE2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CtifQ6PEE2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.19■□□□□ 0.34
CtifQ6PEE2 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CtifQ6PEE2 AV356131-201ENSMUST00000206201 750 ntBASIC17.19■□□□□ 0.34
CtifQ6PEE2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CtifQ6PEE2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.18■□□□□ 0.34
CtifQ6PEE2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CtifQ6PEE2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms