Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Six2Q62232 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Six2Q62232 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.15■□□□□ 0.34
Six2Q62232 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Six2Q62232 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Six2Q62232 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.15■□□□□ 0.34
Six2Q62232 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Six2Q62232 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Six2Q62232 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.14■□□□□ 0.33
Six2Q62232 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.14■□□□□ 0.33
Six2Q62232 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Six2Q62232 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Six2Q62232 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Six2Q62232 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Olfr129-201ENSMUST00000122318 993 ntBASIC17.13■□□□□ 0.33
Six2Q62232 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Six2Q62232 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.13■□□□□ 0.33
Six2Q62232 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Six2Q62232 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Six2Q62232 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Six2Q62232 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.12■□□□□ 0.33
Six2Q62232 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Six2Q62232 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Six2Q62232 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Six2Q62232 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.11■□□□□ 0.33
Six2Q62232 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.11■□□□□ 0.33
Six2Q62232 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.11■□□□□ 0.33
Six2Q62232 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Six2Q62232 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Six2Q62232 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Six2Q62232 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms