Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Gm10175-201ENSMUST00000086013 645 ntBASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf43Q5NCP0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf43Q5NCP0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf43Q5NCP0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.33■□□□□ 0.21
Rnf43Q5NCP0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.33■□□□□ 0.21
Rnf43Q5NCP0 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf43Q5NCP0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Rnf43Q5NCP0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf43Q5NCP0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Gm14822-201ENSMUST00000122247 291 ntBASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Gm25911-201ENSMUST00000157621 56 ntBASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf43Q5NCP0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf43Q5NCP0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms