Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Trim80Q3V061 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim80Q3V061 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Gm10819-201ENSMUST00000099988 561 ntBASIC16.65■□□□□ 0.26
Trim80Q3V061 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim80Q3V061 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trim80Q3V061 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim80Q3V061 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Trim80Q3V061 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.64■□□□□ 0.25
Trim80Q3V061 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim80Q3V061 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.64■□□□□ 0.25
Trim80Q3V061 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trim80Q3V061 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim80Q3V061 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.64■□□□□ 0.25
Trim80Q3V061 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Gm10013-201ENSMUST00000106074 672 ntBASIC16.63■□□□□ 0.25
Trim80Q3V061 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Gm27463-201ENSMUST00000183569 57 ntBASIC16.63■□□□□ 0.25
Trim80Q3V061 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.63■□□□□ 0.25
Trim80Q3V061 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Trim80Q3V061 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim80Q3V061 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Trim80Q3V061 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim80Q3V061 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms