Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Sox6P40645 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.14■□□□□ 0.01
Sox6P40645 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.14■□□□□ 0.01
Sox6P40645 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Mir5130-201ENSMUST00000175160 84 ntBASIC15.14■□□□□ 0.01
Sox6P40645 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Sox6P40645 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Sox6P40645 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Sox6P40645 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox6P40645 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Sox6P40645 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox6P40645 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.13■□□□□ 0.01
Sox6P40645 Gm45058-201ENSMUST00000205810 766 ntBASIC15.13■□□□□ 0.01
Sox6P40645 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Sox6P40645 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Sox6P40645 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Sox6P40645 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Sox6P40645 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.12■□□□□ 0.01
Sox6P40645 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.12■□□□□ 0.01
Sox6P40645 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.12■□□□□ 0.01
Sox6P40645 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Sox6P40645 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Sox6P40645 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.11■□□□□ 0.01
Sox6P40645 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.11■□□□□ 0.01
Sox6P40645 Gm27000-201ENSMUST00000182943 842 ntBASIC15.11■□□□□ 0.01
Sox6P40645 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.11■□□□□ 0.01
Sox6P40645 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Gm9987-201ENSMUST00000069768 567 ntBASIC15.11■□□□□ 0.01
Sox6P40645 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Sox6P40645 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.11■□□□□ 0.01
Sox6P40645 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Sox6P40645 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms