Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Hbb-b1P02088 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hbb-b1P02088 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Hbb-b1P02088 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hbb-b1P02088 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Hbb-b1P02088 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Mir2861-201ENSMUST00000175539 82 ntBASIC11.39□□□□□ -0.59
Hbb-b1P02088 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Hbb-b1P02088 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.38□□□□□ -0.59
Hbb-b1P02088 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Hbb-b1P02088 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Hbb-b1P02088 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms