Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Gm11539-201ENSMUST00000119837 557 ntBASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Pcdh1F7BJK1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Gm18421-201ENSMUST00000204122 625 ntBASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdh1F7BJK1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdh1F7BJK1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdh1F7BJK1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms