Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm13158-201ENSMUST00000122007 736 ntBASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC12.21□□□□□ -0.45
Trav3n-3A0A0G2JEM0 Phf7-203ENSMUST00000226565 1971 ntBASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3n-3A0A0G2JEM0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms