Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 MIRLET7D-201ENST00000362263 87 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU1-133P-201ENST00000364867 167 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-74P-201ENST00000384235 107 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-348P-201ENST00000384386 107 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 AL355143.1-201ENST00000407101 841 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 MTCO2P3-201ENST00000442543 421 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RPS29P15-201ENST00000458329 171 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORD27.1-201ENST00000516319 72 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 SNORD111.1-201ENST00000516421 86 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 MTCO3P23-201ENST00000561363 289 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR4711-201ENST00000578274 70 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-85P-201ENST00000605989 107 ntBASIC0.17□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-349P-201ENST00000362402 107 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP264-201ENST00000363115 107 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU5F-7P-201ENST00000363696 115 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNY1P8-201ENST00000383970 114 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP504-201ENST00000410676 117 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 AC007215.1-201ENST00000464893 276 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-612P-201ENST00000516909 102 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU1-117P-201ENST00000517041 158 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 RNA5SP454-201ENST00000517231 127 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 MTND4LP26-201ENST00000518144 282 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 MIR3192-201ENST00000584920 77 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 AC004223.2-201ENST00000590309 544 ntBASIC0.16□□□□□ -2.38
TMEM56-RWDD3S4R434 MTND4P9-201ENST00000507819 1346 ntBASIC0.15□□□□□ -2.38
TMEM56-RWDD3S4R434 RNU6-227P-201ENST00000362865 103 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 Y_RNA.265-201ENST00000364677 108 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AL663109.1-201ENST00000411498 844 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 GPR143P-201ENST00000434155 205 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 SCARNA18-201ENST00000459004 134 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU7-12P-201ENST00000516030 62 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 RNA5SP220-201ENST00000516298 104 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 BNIP3P39-201ENST00000601077 554 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AL158050.2-201ENST00000605336 568 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AC017083.3-201ENST00000609955 700 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 SEPT14P17-201ENST00000617978 177 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 AC139792.3-201ENST00000623525 224 ntBASIC0.15□□□□□ -2.39
TMEM56-RWDD3S4R434 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1106P-201ENST00000390845 107 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR936-201ENST00000401264 98 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MTCYBP10-201ENST00000424905 650 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AC004854.1-201ENST00000440356 349 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MTCO1P19-201ENST00000443487 500 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 RPS29P27-201ENST00000463711 170 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-344P-201ENST00000516635 111 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MTND4P33-201ENST00000556706 766 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR4703-201ENST00000577728 79 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AL117336.2-201ENST00000602435 335 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AC092354.1-201ENST00000606057 376 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AL136317.1-201ENST00000612653 226 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 AC007014.2-201ENST00000615581 479 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 uc_338.11-201ENST00000619132 160 ntBASIC0.14□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1286P-201ENST00000383871 107 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR122-201ENST00000385044 85 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR216A-201ENST00000385063 110 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR320B2-201ENST00000408479 138 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 USP9YP29-201ENST00000445112 563 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 MTATP6P14-201ENST00000455189 673 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 AC067940.1-201ENST00000458411 300 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 AC108740.1-201ENST00000498629 225 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-405P-201ENST00000516637 110 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR3941-201ENST00000582572 103 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 SCARNA4-201ENST00000629045 128 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 AC007671.2-201ENST00000637344 619 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 AC027514.1-201ENST00000588561 1603 ntBASIC0.13□□□□□ -2.39
TMEM56-RWDD3S4R434 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR103A2-201ENST00000362154 78 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-793P-201ENST00000384233 104 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR1-2-201ENST00000384961 85 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 MIR140-201ENST00000385282 100 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 MRPS18CP6-201ENST00000423587 223 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-1132P-201ENST00000459214 107 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 MTND2P32-201ENST00000521584 1038 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 AP003072.2-201ENST00000527756 676 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 FRG2DP-202ENST00000566967 323 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 RNU6-94P-201ENST00000607728 107 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 RMST_3.1-201ENST00000611651 109 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 AC122133.1-201ENST00000613964 233 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.12□□□□□ -2.39
TMEM56-RWDD3S4R434 AL589743.1-201ENST00000551932 2712 ntBASIC0.11□□□□□ -2.39
TMEM56-RWDD3S4R434 MTND4P4-201ENST00000439033 1366 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms