Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC005592.1-201ENST00000566527 1640 ntBASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
COL4A3BPQ9Y5P4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-308P-201ENST00000390957 107 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 SDAD1P3-201ENST00000427380 333 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 AC005534.2-201ENST00000431047 433 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 AC016717.1-201ENST00000448918 286 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-221P-201ENST00000459541 99 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-826P-201ENST00000516827 104 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 AC018448.1-201ENST00000552843 316 ntBASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
COL4A3BPQ9Y5P4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.31-201ENST00000362574 102 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.80-201ENST00000362996 102 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 SNORD114-6-201ENST00000364393 72 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR1185-2-201ENST00000408687 86 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AL353689.1-201ENST00000438895 199 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AC112492.4-201ENST00000456549 352 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.711-201ENST00000516993 102 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AP005660.1-201ENST00000522972 293 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3169-201ENST00000578032 83 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AC005786.1-201ENST00000588553 154 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 SNORD58B-201ENST00000607313 66 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 AL357075.2-201ENST00000614906 189 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 U4.3-201ENST00000621047 82 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 ZNF72P-201ENST00000425869 1908 ntBASIC2.8□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1227P-201ENST00000383981 107 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.424-201ENST00000384063 103 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1310P-201ENST00000384153 107 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR1283-2-201ENST00000408621 87 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 AC009963.1-201ENST00000417265 157 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MTND1P14-201ENST00000427400 950 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MTND2P29-201ENST00000438595 412 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 AC055731.1-201ENST00000474387 401 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3684-201ENST00000579779 74 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3670-2-201ENST00000582974 65 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3670-1-201ENST00000584160 65 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3670-3-201ENST00000584855 65 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 AL356055.1-201ENST00000602528 446 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3670-4-201ENST00000612260 65 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 Z82195.2-201ENST00000612348 18351 ntBASIC2.79□□□□□ -1.96
COL4A3BPQ9Y5P4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 RNA5SP456-201ENST00000364002 114 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 Y_RNA.202-201ENST00000364083 110 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU4-50P-201ENST00000364361 141 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 RNU1-51P-201ENST00000365345 176 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 XGY1-201ENST00000381172 446 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 SNORA67.4-201ENST00000384688 142 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR518C-201ENST00000384822 101 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 MRPL35P1-201ENST00000404272 572 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 ELOCP21-201ENST00000412558 336 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 AK6P2-201ENST00000549020 471 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR3171-201ENST00000584270 74 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 AL390123.1-201ENST00000603216 237 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 U1.36-201ENST00000620684 176 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 U6.92-201ENST00000636464 89 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 AC245060.5-201ENST00000610778 3293 ntBASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
COL4A3BPQ9Y5P4 MIR410-201ENST00000362222 80 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 RNA5SP126-201ENST00000365092 109 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORD14.1-201ENST00000365609 90 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 DEFA7P-201ENST00000382676 285 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA51.11-201ENST00000384442 131 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 RNA5SP450-201ENST00000411206 102 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 HMGN2P3-201ENST00000433603 273 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 HMGN2P5-201ENST00000436882 273 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 AL163540.1-201ENST00000485382 386 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 Y_RNA.713-201ENST00000517013 96 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 AC020661.2-201ENST00000560114 134 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 AC006001.4-201ENST00000622243 395 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 CTSLP2-204ENST00000629029 392 ntBASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA25.6-201ENST00000364121 118 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 RNU6-926P-201ENST00000384075 107 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 MIR597-201ENST00000384968 97 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 AL078595.1-201ENST00000404458 226 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 SNORA11.4-201ENST00000408823 129 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 RNA5SP475-201ENST00000410568 110 ntBASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
COL4A3BPQ9Y5P4 RAB28P5-201ENST00000427490 651 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms